Variant report

Variant	nsv981587
Chromosome Location	chr7:137197447-137200940
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 149 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:149 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567162991	chr7:137197471-137197472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs376857824	chr7:137197580-137197581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs570578257	chr7:137197596-137197597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs536457716	chr7:137197626-137197627	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs143400307	chr7:137197634-137197635	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs528704383	chr7:137197636-137197637	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs372799372	chr7:137197642-137197643	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs575742050	chr7:137197678-137197679	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs559617325	chr7:137197693-137197694	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs147545968	chr7:137197704-137197705	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs148165426	chr7:137197785-137197786	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs578081847	chr7:137197817-137197818	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs117746920	chr7:137197829-137197830	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs141945371	chr7:137197845-137197846	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs200418345	chr7:137197855-137197856	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs184773902	chr7:137197867-137197868	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs543252004	chr7:137197875-137197876	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs562917480	chr7:137197906-137197907	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs55812334	chr7:137197938-137197939	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs150656086	chr7:137197977-137197978	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs551200513	chr7:137198014-137198015	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139790330	chr7:137198029-137198030	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs75095338	chr7:137198040-137198041	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs546949975	chr7:137198057-137198058	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs567265157	chr7:137198070-137198071	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs112434845	chr7:137198080-137198081	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs558300156	chr7:137198090-137198091	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs10249241	chr7:137198092-137198093	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs537785275	chr7:137198107-137198108	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs569735934	chr7:137198163-137198164	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs558797023	chr7:137198173-137198174	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs557648782	chr7:137198174-137198175	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs538792371	chr7:137198213-137198214	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs558286667	chr7:137198224-137198225	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs578113915	chr7:137198225-137198226	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs540669843	chr7:137198276-137198277	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs189727081	chr7:137198315-137198316	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs149790686	chr7:137198331-137198332	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs542933097	chr7:137198408-137198409	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs180926105	chr7:137198413-137198414	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs531829892	chr7:137198415-137198416	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs545540328	chr7:137198417-137198418	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs564650009	chr7:137198419-137198420	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs527378164	chr7:137198430-137198431	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs146326297	chr7:137198476-137198477	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs566902322	chr7:137198478-137198479	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs115548162	chr7:137198492-137198493	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377294201	chr7:137198506-137198507	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs569905054	chr7:137198532-137198533	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs538464546	chr7:137198579-137198580	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Melanoma	19188590	CNVD
Glioblastoma multiforme	18628472	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Malignant melanoma	17260012	CNVD
Coffin-Siris syndrome	21572526	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	16272173	CNVD
Myxofibrosarcoma	16751306	CNVD
Stuttering	21108403	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Neuroticism	17667963	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute myeloid leukemia	17237825	CNVD
Esophageal cancer	21851588	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cancer	20164919	CNVD

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137148600-137206400	Weak transcription	Aorta	Aorta
2	chr7:137193800-137197600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr7:137194200-137204600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr7:137194200-137205600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:137195800-137197800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr7:137195800-137205800	Weak transcription	Osteobl	bone
7	chr7:137195800-137206000	Weak transcription	HSMM	muscle
8	chr7:137196200-137205600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr7:137197600-137198000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr7:137197800-137198600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr7:137198600-137204200	Weak transcription	Fetal Brain Male	brain
12	chr7:137198600-137204600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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