Variant report

Variant nsv981772
Chromosome Location chr7:56009678-56020897
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:400 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:56004000-56010600 ZNF genes & repeats Liver Liver
2 chr7:56007600-56010000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr7:56007600-56013800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr7:56007600-56019000 Weak transcription Rectal Smooth Muscle rectum
5 chr7:56007800-56010400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr7:56007800-56019200 Weak transcription Ovary ovary
7 chr7:56007800-56019400 Weak transcription Fetal Brain Male brain
8 chr7:56008400-56019000 Weak transcription Brain Germinal Matrix brain
9 chr7:56008400-56019000 Weak transcription Fetal Muscle Leg muscle
10 chr7:56008600-56019000 Weak transcription Fetal Brain Female brain
11 chr7:56009000-56009800 Weak transcription Fetal Stomach stomach
12 chr7:56009400-56010600 Strong transcription Cortex derived primary cultured neurospheres brain
13 chr7:56009400-56018600 Weak transcription Brain Inferior Temporal Lobe brain
14 chr7:56009400-56019200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr7:56009600-56019200 Weak transcription Fetal Lung lung
16 chr7:56009800-56010800 Strong transcription Fetal Stomach stomach
17 chr7:56010400-56010600 ZNF genes & repeats Brain Hippocampus Middle brain
18 chr7:56010400-56010800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
19 chr7:56010400-56010800 ZNF genes & repeats Stomach Smooth Muscle stomach
20 chr7:56010600-56019200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr7:56010600-56019200 Weak transcription Brain Hippocampus Middle brain
22 chr7:56010800-56011800 Weak transcription Fetal Stomach stomach
23 chr7:56011000-56011600 Weak transcription Stomach Smooth Muscle stomach
24 chr7:56011400-56019200 Weak transcription Pancreas Pancrea
25 chr7:56011800-56012200 ZNF genes & repeats Fetal Stomach stomach
26 chr7:56012200-56019200 Weak transcription Fetal Stomach stomach
27 chr7:56012400-56012800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
28 chr7:56012800-56019000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr7:56014000-56014800 Weak transcription Brain Substantia Nigra brain
30 chr7:56017200-56019200 Weak transcription Right Atrium heart
31 chr7:56018000-56018400 Enhancers HepG2 liver
32 chr7:56018400-56019600 Active TSS HepG2 liver
33 chr7:56018400-56020000 Active TSS Placenta Placenta
34 chr7:56018400-56020400 Active TSS ES-I3 Cell Line embryonic stem cell
35 chr7:56018600-56018800 Enhancers Brain Inferior Temporal Lobe brain
36 chr7:56018600-56019000 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr7:56018600-56019000 Enhancers Gastric stomach
38 chr7:56018600-56019000 Enhancers Dnd41 blood
39 chr7:56018600-56020600 Active TSS HUES6 Cell Line embryonic stem cell
40 chr7:56018600-56020800 Active TSS iPS-20b Cell Line embryonic stem cell
41 chr7:56018800-56019000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr7:56018800-56019200 Enhancers Primary T cells fromperipheralblood blood
43 chr7:56018800-56019800 Active TSS Primary T regulatory cells fromperipheralblood blood
44 chr7:56019000-56019200 Enhancers Primary B cells from cord blood blood
45 chr7:56019000-56019200 Enhancers Primary B cells from peripheral blood blood
46 chr7:56019000-56019400 Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr7:56019000-56019400 Active TSS Fetal Muscle Trunk muscle
48 chr7:56019000-56019600 Active TSS Primary T helper naive cells fromperipheralblood blood
49 chr7:56019000-56019600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr7:56019000-56019600 Active TSS Adipose Nuclei Adipose

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