Variant report

Variant	nsv982158
Chromosome Location	chr9:7434898-7436477
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:91 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs550269039	chr9:7434899-7434900	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs370472378	chr9:7434900-7434901	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs147249359	chr9:7434948-7434949	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs139486185	chr9:7434958-7434959	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs530302839	chr9:7435029-7435030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs192163412	chr9:7435033-7435034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs566090606	chr9:7435049-7435050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs77324912	chr9:7435067-7435068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs112601371	chr9:7435084-7435085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs115696368	chr9:7435089-7435090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs529467816	chr9:7435090-7435091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs149666306	chr9:7435149-7435150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs370074124	chr9:7435150-7435151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs375247593	chr9:7435153-7435154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs568258706	chr9:7435156-7435157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs113255750	chr9:7435160-7435161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs189496289	chr9:7435161-7435162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs140280489	chr9:7435165-7435166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs540621188	chr9:7435192-7435193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs549600645	chr9:7435197-7435198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556591688	chr9:7435200-7435201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs145469992	chr9:7435243-7435244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs577243437	chr9:7435246-7435247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs544713640	chr9:7435247-7435248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs201527344	chr9:7435285-7435286	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs374869329	chr9:7435288-7435289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs146478512	chr9:7435326-7435327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs28412790	chr9:7435342-7435343	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs13288502	chr9:7435344-7435345	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs560410703	chr9:7435362-7435363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs7848304	chr9:7435369-7435370	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs551741592	chr9:7435370-7435371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs12350081	chr9:7435387-7435388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs143163294	chr9:7435406-7435407	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs568112094	chr9:7435443-7435444	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs535633159	chr9:7435449-7435450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs148270480	chr9:7435453-7435454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs192398429	chr9:7435490-7435491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs536664773	chr9:7435500-7435501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs184398678	chr9:7435520-7435521	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs140961832	chr9:7435525-7435526	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs146322806	chr9:7435528-7435529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs139173636	chr9:7435532-7435533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs556621584	chr9:7435548-7435549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs12341251	chr9:7435573-7435574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs542012397	chr9:7435606-7435607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs560351405	chr9:7435611-7435612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs536983102	chr9:7435632-7435633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs375602871	chr9:7435698-7435699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs368725068	chr9:7435706-7435707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:7432600-7435000	Enhancers	HMEC	breast
2	chr9:7434600-7439400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr9:7434600-7439800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr9:7434800-7439400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr9:7434800-7439400	Weak transcription	NHEK	skin
6	chr9:7435000-7438000	Weak transcription	HMEC	breast

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