Variant report

Variant	nsv982439
Chromosome Location	chr9:44086935-44088181
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:58 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs375244215	chr9:44086961-44086962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs555780839	chr9:44087145-44087146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs577199360	chr9:44087153-44087154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs539776235	chr9:44087161-44087162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs78375316	chr9:44087162-44087163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs538380416	chr9:44087167-44087168	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs554313119	chr9:44087206-44087207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs572566542	chr9:44087215-44087216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs543298283	chr9:44087222-44087223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs113121380	chr9:44087236-44087237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs555300237	chr9:44087245-44087246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs111854397	chr9:44087266-44087267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs76215702	chr9:44087298-44087299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs576851176	chr9:44087331-44087332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs543823599	chr9:44087341-44087342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs200669783	chr9:44087361-44087362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs192057530	chr9:44087414-44087415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs184104600	chr9:44087464-44087465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs541185039	chr9:44087466-44087467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553306910	chr9:44087468-44087469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs116067291	chr9:44087469-44087470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542275469	chr9:44087486-44087487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs527484453	chr9:44087492-44087493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs188606100	chr9:44087542-44087543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs562049828	chr9:44087549-44087550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs531531141	chr9:44087571-44087572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs575386327	chr9:44087630-44087631	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs549728216	chr9:44087640-44087641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs571176760	chr9:44087689-44087690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs76735330	chr9:44087734-44087735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs544392388	chr9:44087739-44087740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs565828281	chr9:44087748-44087749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs377515542	chr9:44087752-44087753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs62538268	chr9:44087755-44087756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs555236714	chr9:44087756-44087757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs576788071	chr9:44087764-44087765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs62538269	chr9:44087768-44087769	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs558880056	chr9:44087786-44087787	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs62538270	chr9:44087836-44087837	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs370774119	chr9:44087837-44087838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs375322430	chr9:44087838-44087839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs559587374	chr9:44087839-44087840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs200890918	chr9:44087860-44087861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs191430717	chr9:44087876-44087877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs182276571	chr9:44087911-44087912	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs187320001	chr9:44087971-44087972	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs564856352	chr9:44087982-44087983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs532010208	chr9:44088000-44088001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs547410482	chr9:44088001-44088002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs531233634	chr9:44088025-44088026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44071000-44092000	Weak transcription	Liver	Liver

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