Variant report

Variant	nsv982441
Chromosome Location	chr9:44098671-44100558
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 70 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:70 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs570033916	chr9:44098684-44098685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs537091859	chr9:44098685-44098686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs62538300	chr9:44098687-44098688	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs576955857	chr9:44098700-44098701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs567712586	chr9:44098754-44098755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs200046300	chr9:44098755-44098756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs538422594	chr9:44098758-44098759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs62538301	chr9:44098813-44098814	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs572215608	chr9:44098866-44098867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs147514615	chr9:44098901-44098902	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
11	rs112978045	chr9:44098989-44098990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs137977256	chr9:44098995-44098996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs575987547	chr9:44099031-44099032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs576798380	chr9:44099049-44099050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs199633793	chr9:44099058-44099059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs532273484	chr9:44099066-44099067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs547975475	chr9:44099079-44099080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs181198609	chr9:44099085-44099086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs530282905	chr9:44099089-44099090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs62538302	chr9:44099104-44099105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs570292260	chr9:44099133-44099134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs537030246	chr9:44099164-44099165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs552179696	chr9:44099188-44099189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs570580613	chr9:44099189-44099190	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs534809678	chr9:44099192-44099193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs201051371	chr9:44099362-44099363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs373319093	chr9:44099390-44099391	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs199828003	chr9:44099409-44099410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200747567	chr9:44099463-44099464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs373823383	chr9:44099562-44099563	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs201919845	chr9:44099619-44099620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs367747072	chr9:44099706-44099707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs370417720	chr9:44099736-44099737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs374760375	chr9:44099757-44099758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs372521381	chr9:44099785-44099786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs202101097	chr9:44099823-44099824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs572211125	chr9:44099831-44099832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs372578493	chr9:44099950-44099951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs377234157	chr9:44099976-44099977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs368608955	chr9:44100002-44100003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs62538303	chr9:44100021-44100022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200784430	chr9:44100025-44100026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs554840554	chr9:44100029-44100030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs576293506	chr9:44100038-44100039	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs543420502	chr9:44100041-44100042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs200490214	chr9:44100047-44100048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs201425069	chr9:44100061-44100062	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs199599583	chr9:44100113-44100114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs576972360	chr9:44100119-44100120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs200150706	chr9:44100140-44100141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44093400-44109800	Weak transcription	Liver	Liver

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