Variant report

Variant	nsv983027
Chromosome Location	chr11:59245006-59247177
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 98 )
Associated
traits (count: 51 )

Variant overlapped rSNPs/rCNVs (count:98 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs138550724	chr11:59245024-59245025	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs376077519	chr11:59245027-59245028	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs543486925	chr11:59245033-59245034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs370495906	chr11:59245037-59245038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs563150769	chr11:59245045-59245046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs142374527	chr11:59245072-59245073	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs373860379	chr11:59245114-59245115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs200728560	chr11:59245140-59245141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs370996074	chr11:59245153-59245154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs374729334	chr11:59245166-59245167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs567060006	chr11:59245183-59245184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs368827394	chr11:59245188-59245189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs370394695	chr11:59245189-59245190	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs201932630	chr11:59245198-59245199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs559790208	chr11:59245237-59245238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs367584794	chr11:59245238-59245239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs369089799	chr11:59245254-59245255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs537827822	chr11:59245277-59245278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs565578710	chr11:59245278-59245279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs373157734	chr11:59245286-59245287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556173099	chr11:59245300-59245301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs368659767	chr11:59245301-59245302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs150157498	chr11:59245304-59245305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs373869761	chr11:59245328-59245329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs376312919	chr11:59245346-59245347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs199559831	chr11:59245366-59245367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs373005301	chr11:59245369-59245370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs377575891	chr11:59245370-59245371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs370535826	chr11:59245373-59245374	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs200781301	chr11:59245374-59245375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs368238940	chr11:59245383-59245384	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs572213379	chr11:59245385-59245386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs371192257	chr11:59245386-59245387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs375485138	chr11:59245409-59245410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201321935	chr11:59245410-59245411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs201743090	chr11:59245416-59245417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs554646357	chr11:59245417-59245418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs370794946	chr11:59245449-59245450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs200175576	chr11:59245450-59245451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs181533598	chr11:59245464-59245465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs115103216	chr11:59245483-59245484	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs533637785	chr11:59245490-59245491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs371538486	chr11:59245492-59245493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs545695654	chr11:59245493-59245494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs560664662	chr11:59245494-59245495	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs527885516	chr11:59245496-59245497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs375223922	chr11:59245520-59245521	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs369750747	chr11:59245522-59245523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs376736724	chr11:59245556-59245557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs373329511	chr11:59245569-59245570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:51)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Esophageal cancer	21851588	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Autism	22495309	CNVD
Autism	20808228	CNVD
Acute lymphoblastic leukemia	21339820	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59243400-59246800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr11:59246400-59246800	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr11:59246800-59248200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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