Variant report

Variant	nsv983159
Chromosome Location	chr11:106240920-106249260
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 79 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:79 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567833793	chr11:106240948-106240949	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs370021844	chr11:106240993-106240994	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs608056	chr11:106241093-106241094	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs564105859	chr11:106241119-106241120	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs532139564	chr11:106241163-106241164	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs34445043	chr11:106241164-106241165	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs528103290	chr11:106241204-106241205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs546476021	chr11:106241211-106241212	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs370967187	chr11:106241224-106241225	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs561615773	chr11:106241236-106241237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs529174986	chr11:106241245-106241246	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs11602317	chr11:106241259-106241260	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559135473	chr11:106241260-106241261	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs568723122	chr11:106241324-106241325	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs533460041	chr11:106241348-106241349	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs551610059	chr11:106241373-106241374	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs113449395	chr11:106241375-106241376	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs530985615	chr11:106241388-106241389	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs533904675	chr11:106241398-106241399	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs115630989	chr11:106247254-106247255	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs564259105	chr11:106247319-106247320	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs533000648	chr11:106247357-106247358	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs563293980	chr11:106247394-106247395	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs530465160	chr11:106247402-106247403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs560337	chr11:106247407-106247408	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs191582117	chr11:106247415-106247416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs183486486	chr11:106247416-106247417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs528391766	chr11:106247460-106247461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs565817628	chr11:106247549-106247550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs73549507	chr11:106247579-106247580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs77910569	chr11:106247585-106247586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs529324135	chr11:106247593-106247594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs186405085	chr11:106247594-106247595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs569224499	chr11:106247606-106247607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs190130700	chr11:106247635-106247636	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs539407110	chr11:106247657-106247658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs182395467	chr11:106247704-106247705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs529456880	chr11:106247811-106247812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs80244798	chr11:106247852-106247853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs186729053	chr11:106247857-106247858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs548172015	chr11:106247908-106247909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs192695676	chr11:106247940-106247941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs555977551	chr11:106247941-106247942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs574333747	chr11:106247960-106247961	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs596286	chr11:106248019-106248020	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs556742941	chr11:106248033-106248034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs138964717	chr11:106248057-106248058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs183903862	chr11:106248087-106248088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs532114	chr11:106248166-106248167	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs145887800	chr11:106248197-106248198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Obesity	19966786	CNVD
Prostate cancer	18632612	CNVD
Melanoma	17363583	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106238400-106241200	Enhancers	NHDF-Ad	bronchial
2	chr11:106238600-106241200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr11:106239600-106241400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr11:106240800-106241000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr11:106247200-106247400	Enhancers	Dnd41	blood
6	chr11:106247400-106248400	Weak transcription	Dnd41	blood
7	chr11:106248400-106249400	Enhancers	Dnd41	blood

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