Variant report

Variant	nsv9841
Chromosome Location	chr21:14437499-14468201
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-POTED-4	chr21:14437496-14438020	NR_026916
2	lnc-POTED-4	chr21:14439173-14439369	NR_026916
3	lnc-POTED-4	chr21:14439173-14439296	XLOC_013857
4	lnc-POTED-4	chr21:14441496-14441613	NR_026916
5	lnc-POTED-4	chr21:14439853-14440186	NONHSAT081096
6	lnc-POTED-4	chr21:14437894-14438020	XLOC_013857

Extended variants
information (count: 98 )
Associated
traits (count: 52 )

Variant overlapped rSNPs/rCNVs (count:98 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs139534182	chr21:14437521-14437522	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs4818707	chr21:14437531-14437532	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs145444518	chr21:14437575-14437576	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs532047891	chr21:14437583-14437584	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs73338933	chr21:14437585-14437586	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs144128537	chr21:14437598-14437599	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs552225360	chr21:14437618-14437619	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs565681921	chr21:14437620-14437621	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs200006842	chr21:14437626-14437627	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs535219341	chr21:14437635-14437636	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs10439633	chr21:14437640-14437641	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs190642385	chr21:14437641-14437642	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs537711265	chr21:14437656-14437657	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs374143564	chr21:14437659-14437660	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs4546081	chr21:14437674-14437675	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs552190035	chr21:14437681-14437682	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs566033577	chr21:14437682-14437683	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs74439461	chr21:14437687-14437688	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs574362654	chr21:14437700-14437701	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs577152559	chr21:14437711-14437712	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs539496830	chr21:14437717-14437718	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs553423119	chr21:14437722-14437723	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs573217318	chr21:14437729-14437730	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs182072656	chr21:14437746-14437747	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs187675193	chr21:14437755-14437756	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs11088945	chr21:14437763-14437764	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs10439634	chr21:14437771-14437772	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs560724179	chr21:14437804-14437805	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs190585876	chr21:14437845-14437846	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs543299398	chr21:14437846-14437847	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs375728769	chr21:14437851-14437852	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
32	rs563466275	chr21:14437854-14437855	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs532128105	chr21:14437855-14437856	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs34557750	chr21:14437858-14437859	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs200630173	chr21:14437865-14437866	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs555864373	chr21:14437866-14437867	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
37	rs76662296	chr21:14437867-14437868	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs201955353	chr21:14437870-14437871	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs544638589	chr21:14437871-14437872	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs562866901	chr21:14437879-14437880	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs559307489	chr21:14437882-14437883	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs528144020	chr21:14437890-14437891	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs138124614	chr21:14437900-14437901	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs568634210	chr21:14437918-14437919	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs3133007	chr21:14437963-14437964	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs537676065	chr21:14437984-14437985	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs551233604	chr21:14437987-14437988	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs3106002	chr21:14437989-14437990	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs557587207	chr21:14437996-14437997	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
50	rs571098511	chr21:14437997-14437998	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:52)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Sudden cardiac death	19188705	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
T-cell lymphomas	19863542	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Myelofibrosis	22110671	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Metanephric adenoma	20802469	CNVD
Neuroblastoma	18923191	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Cancer	20164919	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	20409316	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
lymphocytic leukemia	21291569	CNVD

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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