Variant report

Variant	nsv997872
Chromosome Location	chr3:399517-779333
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1654)
CpG islands
(count:611)
Chromatin interactive
region (count:45)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:1654 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:418748-419094	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:455772-456068	HepG2	liver:	n/a	chr3:455850-455866
4	BACH1	chr3:516562-516874	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr3:505464-505768	GM12878	blood:	n/a	n/a
8	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
9	BATF	chr3:515030-515408	GM12878	blood:	n/a	chr3:515252-515263
10	BATF	chr3:462357-462600	GM12878	blood:	n/a	chr3:462485-462494
11	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
12	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
13	BATF	chr3:515014-515376	GM12878	blood:	n/a	chr3:515252-515263
14	BATF	chr3:462277-462661	GM12878	blood:	n/a	chr3:462485-462494
15	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
16	BHLHE40	chr3:543200-543216	GM12878	blood:	n/a	n/a
17	BHLHE40	chr3:462348-462658	GM12878	blood:	n/a	n/a
18	BHLHE40	chr3:401416-401710	GM12878	blood:	n/a	n/a
19	BRCA1	chr3:639591-639851	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr3:463605-463647	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr3:467465-468300	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr3:674381-674581	H1-hESC	embryonic stem cell:	n/a	n/a
23	BRCA1	chr3:754720-755580	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr3:638578-639330	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr3:649451-649478	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr3:452366-452605	IMR90	lung:	n/a	chr3:452447-452458
27	CEBPB	chr3:775096-775429	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr3:494829-495089	A549	lung:	n/a	n/a
29	CEBPB	chr3:766071-766268	HepG2	liver:	n/a	chr3:766173-766184
30	CEBPB	chr3:438012-438371	IMR90	lung:	n/a	chr3:438182-438195 chr3:438184-438193
31	CEBPB	chr3:534354-535027	Hela-S3	cervix:	n/a	chr3:534767-534778
32	CEBPB	chr3:468928-469135	H1-hESC	embryonic stem cell:	n/a	chr3:468996-469009 chr3:469100-469117 chr3:468998-469009
33	CEBPB	chr3:437995-438379	Hela-S3	cervix:	n/a	chr3:438182-438195 chr3:438184-438193
34	CEBPB	chr3:544942-545225	HepG2	liver:	n/a	chr3:545063-545076 chr3:545064-545075
35	CEBPB	chr3:438085-438248	K562	blood:	n/a	chr3:438182-438195 chr3:438184-438193
36	CEBPB	chr3:468815-469191	Hela-S3	cervix:	n/a	chr3:468996-469009 chr3:469100-469117 chr3:468998-469009
37	CEBPB	chr3:526407-526558	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr3:672488-672700	HepG2	liver:	n/a	chr3:672554-672567 chr3:672555-672566
39	CEBPB	chr3:649124-649464	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr3:700968-701307	HepG2	liver:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
41	CEBPB	chr3:700997-701241	H1-hESC	embryonic stem cell:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
42	CEBPB	chr3:406009-406340	HepG2	liver:	n/a	chr3:406169-406180 chr3:406169-406182 chr3:406171-406182
43	CEBPB	chr3:544957-545231	H1-hESC	embryonic stem cell:	n/a	chr3:545063-545076 chr3:545064-545075
44	CEBPB	chr3:544911-545212	IMR90	lung:	n/a	chr3:545063-545076 chr3:545064-545075
45	CEBPB	chr3:526427-526685	HepG2	liver:	n/a	n/a
46	CEBPB	chr3:450708-451032	IMR90	lung:	n/a	n/a
47	CEBPB	chr3:650039-650244	HepG2	liver:	n/a	chr3:650073-650084 chr3:650075-650084
48	CEBPB	chr3:591255-591764	Hela-S3	cervix:	n/a	n/a
49	CEBPB	chr3:450769-450941	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr3:473256-473490	A549	lung:	n/a	chr3:473347-473358

(count:611 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:523375-523425	AG10803	skin:	n/a
2	chr3:523375-523425	AG10803	skin:	n/a
3	chr3:491979-492029	BE2_C	brain:	n/a
4	chr3:491979-492029	AG04449	skin:	fetal
5	chr3:447414-447464	IMR90	lung:	fetal
6	chr3:577629-577679	HNPCEpiC	eye:	n/a
7	chr3:523375-523425	U87	brain:	n/a
8	chr3:577964-578014	T-47D	breast:	n/a
9	chr3:427558-427608	GM06990	blood:	n/a
10	chr3:427558-427608	HEK293	kidney:	embryo
11	chr3:501673-501723	AG09309	skin:	n/a
12	chr3:501673-501723	ECC-1	luminal epithelium:	n/a
13	chr3:523012-523062	HCPEpiC	choroid plexus:	n/a
14	chr3:577964-578014	GM12892	blood:	n/a
15	chr3:501673-501723	NH-A	brain:	n/a
16	chr3:577629-577679	SK-N-SH_RA	brain:	n/a
17	chr3:427558-427608	HUVEC	blood vessel:	n/a
18	chr3:447414-447464	HPAEpiC	pulmonary alveolar:	n/a
19	chr3:501673-501723	Hepatocyte	liver:	n/a
20	chr3:577629-577679	IMR90	lung:	fetal
21	chr3:523012-523062	T-47D	breast:	n/a
22	chr3:577821-577871	NH-A	brain:	n/a
23	chr3:577821-577871	GM12891	blood:	n/a
24	chr3:577629-577679	MCF-7	breast:	n/a
25	chr3:501673-501723	PrEC	prostate:	n/a
26	chr3:577821-577871	HCPEpiC	choroid plexus:	n/a
27	chr3:577964-578014	SK-N-MC	brain:	n/a
28	chr3:523375-523425	Hepatocyte	liver:	n/a
29	chr3:577821-577871	AG10803	skin:	n/a
30	chr3:577821-577871	GM12892	blood:	n/a
31	chr3:427558-427608	SAEC	small airway:	n/a
32	chr3:427757-427807	HCM	heart:	n/a
33	chr3:577821-577871	AG04449	skin:	fetal
34	chr3:523012-523062	SK-N-SH_RA	brain:	n/a
35	chr3:577821-577871	AoSMC	blood vessel:	n/a
36	chr3:523375-523425	K562	blood:	n/a
37	chr3:491979-492029	SK-N-SH_RA	brain:	n/a
38	chr3:577964-578014	NB4	blood:	n/a
39	chr3:523375-523425	SKMC	muscle:	n/a
40	chr3:491979-492029	NH-A	brain:	n/a
41	chr3:577964-578014	HUVEC	blood vessel:	n/a
42	chr3:577821-577871	HMEC	breast:	n/a
43	chr3:577821-577871	LNCaP	prostate:	n/a
44	chr3:577629-577679	Caco-2	colon:	n/a
45	chr3:491979-492029	SK-N-SH	brain:	n/a
46	chr3:523012-523062	HPAEpiC	pulmonary alveolar:	n/a
47	chr3:427558-427608	HRE	kidney:	n/a
48	chr3:577629-577679	NB4	blood:	n/a
49	chr3:491979-492029	SAEC	small airway:	n/a
50	chr3:491979-492029	AG09309	skin:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
2	chr3:84682..85249-chr3:418773..419384,2	MCF-7	breast:
3	chr3:455533..456082-chr3:893341..894026,2	MCF-7	breast:
4	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
5	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
6	chr3:457571..459756-chr3:462210..465015,2	K562	blood:
7	chr20:12921782..12922300-chr3:762237..762760,2	MCF-7	breast:
8	chr12:101154422..101155178-chr3:753774..754622,2	MCF-7	breast:
9	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
10	chr20:14175439..14177996-chr3:730394..733241,2	MCF-7	breast:
11	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
12	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
13	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
14	chr3:457571..459756-chr3:462210..465015,2	K562	blood:
15	chr3:726576..727076-chr3:11025934..11026463,2	MCF-7	breast:
16	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
17	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
18	chr3:423895..425881-chr3:427804..430449,2	K562	blood:
19	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
20	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
21	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
22	chr3:423895..425881-chr3:427804..430449,2	K562	blood:
23	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
24	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
25	chr3:496434..499262-chr3:500586..502601,2	K562	blood:
26	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
27	chr3:323232..326179-chr3:404720..407065,2	K562	blood:
28	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
29	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
30	chr3:426526..428688-chr3:432686..435480,2	K562	blood:
31	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
32	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
33	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
34	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
35	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
36	chr3:453296..456199-chr3:456966..458950,2	K562	blood:
37	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
38	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
39	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
40	chr3:395767..396427-chr3:418920..419430,2	MCF-7	breast:
41	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
42	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
43	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
44	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
45	chr1:229050784..229051693-chr3:758018..758663,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL5RA-5	chr3:405053-405706	ENSG00000234661.1
2	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
3	lnc-IL5RA-5	chr3:424250-424415	ENSG00000234661.1
4	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570
5	lnc-CHL1-6	chr3:766898-766933	ucscGeneNc_uc003boy_1
6	lnc-CHL1-6	chr3:552914-553010	ucscGeneNc_uc003boy_1
7	lnc-CHL1-3	chr3:633788-633866	NR_110118
8	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
9	lnc-IL5RA-5	chr3:427386-427478	ENSG00000234661.1
10	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
11	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
12	lnc-IL5RA-5	chr3:405518-405706	ENSG00000234661.2
13	lnc-IL5RA-5	chr3:415500-415735	ENSG00000234661.2

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CHL1	hsa-miR-10a-5p	chr3:450185-450191
2	CHL1	hsa-miR-181a-5p	chr3:448562-448584
3	CHL1	hsa-miR-10a-5p	chr3:450171-450192

Variant related genes	Relation type
ENSG00000224957	TF binding region
CHL1-AS1	TF binding region
ENSG00000238075	TF binding region
CHL1	TF binding region
ENSG00000224957	CpG island
CHL1-AS1	CpG island
ENSG00000238075	CpG island
CHL1	CpG island
ENSG00000252017	chromatin interactions
ENSG00000234661	chromatin interactions
DCBLD2	miRNA target sites

Extended variants
information (count: 9324 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:9324 , 50 per page) page: 1 2 3 4 5 6 7 ... 187

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181386843	chr3:399557-399558	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs117399624	chr3:399563-399564	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs149855276	chr3:399564-399565	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs374618109	chr3:399595-399596	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs576199393	chr3:399604-399605	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs115923993	chr3:399616-399617	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs186014919	chr3:399630-399631	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs562339629	chr3:399650-399651	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs147922115	chr3:399708-399709	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs367830579	chr3:399713-399714	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs73814711	chr3:399731-399732	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs559733206	chr3:399751-399752	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs536329470	chr3:399757-399758	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs548336272	chr3:399759-399760	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs143329738	chr3:399771-399772	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs191773891	chr3:399833-399834	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs141778735	chr3:399861-399862	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs115116338	chr3:399888-399889	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs73103184	chr3:399890-399891	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs570654414	chr3:399891-399892	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs539966542	chr3:399899-399900	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs534956359	chr3:399938-399939	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs552677942	chr3:399939-399940	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs551573395	chr3:399955-399956	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs35073337	chr3:399966-399967	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs535125945	chr3:399971-399972	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs184018139	chr3:399974-399975	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs575002623	chr3:399980-399981	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs543560892	chr3:399990-399991	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs565183006	chr3:400018-400019	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs375014752	chr3:400075-400076	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs537598816	chr3:400112-400113	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs76757142	chr3:400114-400115	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs558896986	chr3:400160-400161	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs530074032	chr3:400198-400199	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs556056411	chr3:400212-400213	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs188811097	chr3:400249-400250	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs147706283	chr3:400250-400251	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs79808268	chr3:400262-400263	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs113281056	chr3:400263-400264	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs149166281	chr3:400265-400266	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs76630963	chr3:400352-400353	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs570659240	chr3:400353-400354	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs9823348	chr3:400357-400358	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs190848693	chr3:400432-400433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs143218148	chr3:400437-400438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs535040699	chr3:400486-400487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs148303063	chr3:400502-400503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs568606197	chr3:400527-400528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs539183622	chr3:400571-400572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD

Chromatin state (count:654 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:366000-410400	Weak transcription	Brain Anterior Caudate	brain
2	chr3:385200-420200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr3:389200-404000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr3:392400-409000	Weak transcription	Fetal Brain Female	brain
5	chr3:392800-406400	Weak transcription	Brain Germinal Matrix	brain
6	chr3:393000-403000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr3:396600-400800	Weak transcription	Primary B cells from peripheral blood	blood
8	chr3:396600-401400	Weak transcription	Fetal Brain Male	brain
9	chr3:396800-400000	Enhancers	Rectal Smooth Muscle	rectum
10	chr3:397200-415000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr3:397600-403400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr3:397600-453400	Weak transcription	Brain Angular Gyrus	brain
13	chr3:398000-400400	Enhancers	Colon Smooth Muscle	Colon
14	chr3:398200-400000	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr3:398400-415000	Weak transcription	Brain Cingulate Gyrus	brain
16	chr3:398600-408800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr3:398600-411200	Weak transcription	Brain Hippocampus Middle	brain
18	chr3:399000-406000	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr3:399000-414800	Weak transcription	Ovary	ovary
20	chr3:399400-400000	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr3:400400-401400	Weak transcription	Colon Smooth Muscle	Colon
22	chr3:400800-402200	Enhancers	Primary B cells from peripheral blood	blood
23	chr3:400800-413400	Weak transcription	Adipose Nuclei	Adipose
24	chr3:401200-401400	Enhancers	Brain Substantia Nigra	brain
25	chr3:401400-401600	Enhancers	Colon Smooth Muscle	Colon
26	chr3:401400-401800	Enhancers	GM12878-XiMat	blood
27	chr3:401400-402200	Strong transcription	Fetal Brain Male	brain
28	chr3:401400-405200	Weak transcription	Brain Substantia Nigra	brain
29	chr3:402200-409400	Weak transcription	Fetal Brain Male	brain
30	chr3:403000-405000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
31	chr3:403400-405000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr3:404000-404200	Enhancers	Pancreatic Islets	Pancreatic Islet
33	chr3:404200-404600	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr3:404600-405000	Enhancers	Pancreatic Islets	Pancreatic Islet
35	chr3:405000-407600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr3:405000-409600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr3:407000-407600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr3:407000-407800	Enhancers	Fetal Lung	lung
39	chr3:407000-409200	Enhancers	Fetal Kidney	kidney
40	chr3:407600-409400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr3:408400-416200	Weak transcription	Brain Substantia Nigra	brain
42	chr3:408800-409200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr3:409000-409400	Strong transcription	Fetal Brain Female	brain
44	chr3:409400-410200	Weak transcription	Fetal Brain Female	brain
45	chr3:409400-419800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr3:409600-409800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
47	chr3:411600-414600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
48	chr3:412000-414800	Weak transcription	Brain Germinal Matrix	brain
49	chr3:412800-430400	Weak transcription	Fetal Brain Female	brain
50	chr3:414600-415600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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