No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs1427292 |
chr2:231045388-231045389 |
Enhancers Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs144102659 |
chr2:231045412-231045413 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs550207080 |
chr2:231045521-231045522 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs191734656 |
chr2:231045528-231045529 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs572998619 |
chr2:231045529-231045530 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs554458024 |
chr2:231045573-231045574 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs572922712 |
chr2:231045621-231045622 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs541813465 |
chr2:231045715-231045716 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs10168057 |
chr2:231045758-231045759 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs578084276 |
chr2:231045784-231045785 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs531959848 |
chr2:231045790-231045791 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs573584503 |
chr2:231045801-231045802 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs200497706 |
chr2:231045901-231045902 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs545521733 |
chr2:231045920-231045921 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs116156957 |
chr2:231045921-231045922 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs575726527 |
chr2:231045927-231045928 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs4973285 |
chr2:231045943-231045944 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs561655537 |
chr2:231045961-231045962 |
Weak transcription Strong transcription Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs77807964 |
chr2:231045978-231045979 |
Weak transcription Strong transcription Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs374182916 |
chr2:231046002-231046003 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs559639233 |
chr2:231046100-231046101 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs181756812 |
chr2:231046103-231046104 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs532028819 |
chr2:231046112-231046113 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs146884976 |
chr2:231046131-231046132 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs58203458 |
chr2:231046149-231046150 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs529661379 |
chr2:231046159-231046160 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs548164596 |
chr2:231046169-231046170 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs186532511 |
chr2:231046176-231046177 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs561703220 |
chr2:231046195-231046196 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs558672282 |
chr2:231046207-231046208 |
Weak transcription Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs34618178 |
chr2:231046292-231046293 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs12618921 |
chr2:231046312-231046313 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs539103581 |
chr2:231046321-231046322 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs4327229 |
chr2:231046328-231046329 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs575689930 |
chr2:231046358-231046359 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs141625001 |
chr2:231046395-231046396 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs191393945 |
chr2:231046396-231046397 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs573524627 |
chr2:231046432-231046433 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs12615975 |
chr2:231046438-231046439 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
40 |
rs530804426 |
chr2:231046465-231046466 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs565433767 |
chr2:231046495-231046496 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs182335265 |
chr2:231046500-231046501 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs529329088 |
chr2:231046522-231046523 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs543874305 |
chr2:231046598-231046599 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs4542839 |
chr2:231046602-231046603 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
46 |
rs529625387 |
chr2:231046638-231046639 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs548216588 |
chr2:231046717-231046718 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs371794411 |
chr2:231046733-231046734 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs56301614 |
chr2:231046734-231046735 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
50 |
rs535363918 |
chr2:231046753-231046754 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|