Variant report

Variant	nsv998388
Chromosome Location	chr3:145960954-146087749
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:845)
CpG islands
(count:855)
Chromatin interactive
region (count:28)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:845 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:145995769-145995872	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:146044949-146045258	HepG2	liver:	n/a	n/a
3	BACH1	chr3:145968459-145969085	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr3:145968815-145968925	K562	blood:	n/a	n/a
5	BRCA1	chr3:146031031-146032435	Hela-S3	cervix:	n/a	n/a
6	CBX3	chr3:146028686-146029049	HCT-116	colon:	n/a	n/a
7	CBX3	chr3:146028606-146029007	HCT-116	colon:	n/a	n/a
8	CCNT2	chr3:145968563-145969088	K562	blood:	n/a	n/a
9	CEBPB	chr3:146043015-146043294	HepG2	liver:	n/a	chr3:146043140-146043151
10	CEBPB	chr3:146025941-146026793	IMR90	lung:	n/a	chr3:146026620-146026633
11	CEBPB	chr3:145967604-145968179	Hela-S3	cervix:	n/a	chr3:145968037-145968048 chr3:145968037-145968050 chr3:145968037-145968048
12	CEBPB	chr3:145995622-145996180	A549	lung:	n/a	chr3:145995856-145995867
13	CEBPB	chr3:146060963-146061244	IMR90	lung:	n/a	chr3:146061156-146061169
14	CEBPB	chr3:145982753-145983062	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr3:146071206-146071493	HepG2	liver:	n/a	chr3:146071364-146071375 chr3:146071363-146071376
16	CEBPB	chr3:145995697-145996043	HepG2	liver:	n/a	chr3:145995856-145995867
17	CEBPB	chr3:145995660-145996069	ECC-1	luminal epithelium:	n/a	chr3:145995856-145995867
18	CEBPB	chr3:145989088-145989213	H1-hESC	embryonic stem cell:	n/a	n/a
19	CEBPB	chr3:146031135-146032514	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr3:145995685-145996059	Hela-S3	cervix:	n/a	chr3:145995856-145995867
21	CEBPB	chr3:146071214-146071497	Hela-S3	cervix:	n/a	chr3:146071364-146071375 chr3:146071363-146071376
22	CEBPB	chr3:145967627-145968119	IMR90	lung:	n/a	chr3:145968037-145968048 chr3:145968037-145968050 chr3:145968037-145968048
23	CEBPB	chr3:145992582-145992988	IMR90	lung:	n/a	n/a
24	CEBPB	chr3:146012250-146012313	A549	lung:	n/a	n/a
25	CEBPB	chr3:146000445-146000740	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr3:146032282-146032340	A549	lung:	n/a	n/a
27	CEBPB	chr3:145989091-145989307	A549	lung:	n/a	n/a
28	CEBPB	chr3:145995712-145996041	A549	lung:	n/a	chr3:145995856-145995867
29	CEBPB	chr3:145995666-145996074	IMR90	lung:	n/a	chr3:145995856-145995867
30	CEBPB	chr3:145995668-145996055	A549	lung:	n/a	chr3:145995856-145995867
31	CEBPB	chr3:146070274-146070554	HepG2	liver:	n/a	chr3:146070424-146070435
32	CEBPB	chr3:146044962-146045293	IMR90	lung:	n/a	n/a
33	CEBPB	chr3:146074997-146075252	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr3:145968610-145968627	K562	blood:	n/a	n/a
35	CEBPB	chr3:145975222-145975278	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr3:146071185-146071544	A549	lung:	n/a	chr3:146071364-146071375 chr3:146071363-146071376
37	CEBPB	chr3:146025863-146026853	Hela-S3	cervix:	n/a	chr3:146026620-146026633
38	CEBPB	chr3:146067053-146067336	HepG2	liver:	n/a	chr3:146067178-146067189
39	CEBPB	chr3:145968381-145969227	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr3:146071230-146071515	IMR90	lung:	n/a	chr3:146071364-146071375 chr3:146071363-146071376
41	CEBPB	chr3:146070269-146070530	A549	lung:	n/a	chr3:146070424-146070435
42	CEBPB	chr3:146050265-146050341	K562	blood:	n/a	n/a
43	CEBPB	chr3:145967647-145967801	K562	blood:	n/a	n/a
44	CEBPB	chr3:145965734-145966053	Hela-S3	cervix:	n/a	n/a
45	CEBPB	chr3:145995594-145996124	ECC-1	luminal epithelium:	n/a	chr3:145995856-145995867
46	CEBPB	chr3:145967646-145968183	A549	lung:	n/a	chr3:145968037-145968048 chr3:145968037-145968050 chr3:145968037-145968048
47	CEBPB	chr3:146043001-146043313	IMR90	lung:	n/a	chr3:146043140-146043151
48	CHD1	chr3:145983326-145983397	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr3:146031228-146031907	Hela-S3	cervix:	n/a	n/a
50	CHD2	chr3:145968318-145969145	Hela-S3	cervix:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:145968722-145968772	NHDF-neo	bronchial:	n/a
2	chr3:145968722-145968772	NHDF-neo	bronchial:	n/a
3	chr3:145969007-145969057	HepG2	liver:	n/a
4	chr3:145969718-145969768	HEEpiC	esophagus:	n/a
5	chr3:145969718-145969768	HCF	heart:	n/a
6	chr3:145968620-145968670	A549	lung:	n/a
7	chr3:145969007-145969057	HMEC	breast:	n/a
8	chr3:145968700-145968750	SK-N-SH_RA	brain:	n/a
9	chr3:145968696-145968746	MCF-7	breast:	n/a
10	chr3:145968620-145968670	HUVEC	blood vessel:	n/a
11	chr3:145968726-145968776	T-47D	breast:	n/a
12	chr3:146026497-146026547	U87	brain:	n/a
13	chr3:145968620-145968670	RPTEC	kidney:	n/a
14	chr3:145968242-145968292	Jurkat	blood:	n/a
15	chr3:145968620-145968670	GM06990	blood:	n/a
16	chr3:145968242-145968292	HAEpiC	amniotic membrane:	n/a
17	chr3:145970385-145970435	MCF10A-Er-Src	breast:	n/a
18	chr3:145969625-145969675	HCPEpiC	choroid plexus:	n/a
19	chr3:145968700-145968750	H1-hESC	embryonic stem cell:	embryo
20	chr3:145968722-145968772	AG09319	gingival:	n/a
21	chr3:145969579-145969629	AG10803	skin:	n/a
22	chr3:145969579-145969629	HAEpiC	amniotic membrane:	n/a
23	chr3:145970385-145970435	LNCaP	prostate:	n/a
24	chr3:145968696-145968746	Caco-2	colon:	n/a
25	chr3:145968389-145968439	ovcar-3	ovarian:	n/a
26	chr3:145968389-145968439	HCT-116	colon:	n/a
27	chr3:145969579-145969629	RPTEC	kidney:	n/a
28	chr3:145969718-145969768	PANC-1	pancreas:	n/a
29	chr3:145969625-145969675	AG10803	skin:	n/a
30	chr3:145969579-145969629	BJ	skin:	n/a
31	chr3:145969007-145969057	BJ	skin:	n/a
32	chr3:145968389-145968439	HEEpiC	esophagus:	n/a
33	chr3:145968726-145968776	GM06990	blood:	n/a
34	chr3:145969718-145969768	HCT-116	colon:	n/a
35	chr3:145970385-145970435	HepG2	liver:	n/a
36	chr3:145968692-145968742	GM12892	blood:	n/a
37	chr3:145968696-145968746	T-47D	breast:	n/a
38	chr3:145969007-145969057	GM19239	blood:	n/a
39	chr3:146026497-146026547	NHBE	bronchial:	n/a
40	chr3:145969579-145969629	BE2_C	brain:	n/a
41	chr3:146026497-146026547	GM12892	blood:	n/a
42	chr3:145970385-145970435	ECC-1	luminal epithelium:	n/a
43	chr3:145968620-145968670	HMEC	breast:	n/a
44	chr3:145968726-145968776	K562	blood:	n/a
45	chr3:145968722-145968772	SAEC	small airway:	n/a
46	chr3:145968696-145968746	AG09309	skin:	n/a
47	chr3:145969579-145969629	HCM	heart:	n/a
48	chr3:145968692-145968742	HRE	kidney:	n/a
49	chr3:145969718-145969768	SK-N-SH	brain:	n/a
50	chr3:145968389-145968439	AG04449	skin:	fetal

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:145992454..145994295-chr3:145994384..145997157,2	K562	blood:
2	chr3:146051931..146052494-chr3:146139879..146140654,2	MCF-7	breast:
3	chr3:146017468..146019765-chr3:146026465..146028948,2	MCF-7	breast:
4	chr3:145907332..145908011-chr3:146044703..146045227,2	K562	blood:
5	chr3:146053792..146056507-chr3:146270955..146273271,2	K562	blood:
6	chr3:146044568..146045746-chr3:146099870..146100750,3	MCF-7	breast:
7	chr3:146017468..146019765-chr3:146026465..146028948,2	MCF-7	breast:
8	chr3:145961600..145965107-chr3:145968575..145970473,3	K562	blood:
9	chr3:146051675..146052565-chr3:146295209..146295722,2	MCF-7	breast:
10	chr3:145936462..145937370-chr3:146044619..146045821,9	MCF-7	breast:
11	chr3:145937350..145938198-chr3:146044684..146045576,2	K562	blood:
12	chr3:145938654..145939295-chr3:146044870..146045659,2	MCF-7	breast:
13	chr3:145938109..145938869-chr3:146044708..146045495,2	MCF-7	breast:
14	chr3:145878599..145881384-chr3:145968449..145970595,2	MCF-7	breast:
15	chr3:145936384..145937370-chr3:146044670..146045567,4	MCF-7	breast:
16	chr3:145940299..145941372-chr3:146044662..146045624,8	MCF-7	breast:
17	chr3:146051922..146052597-chr3:146295303..146296107,2	MCF-7	breast:
18	chr3:145986622..145989134-chr3:145993598..145995580,2	MCF-7	breast:
19	chr20:56268200..56270406-chr3:146031191..146033715,2	MCF-7	breast:
20	chr3:146044616..146045587-chr3:146295200..146296047,4	MCF-7	breast:
21	chr3:145992454..145994295-chr3:145994384..145997157,2	K562	blood:
22	chr3:145783038..145783586-chr3:146044661..146045578,2	MCF-7	breast:
23	chr3:145986622..145989134-chr3:145993598..145995580,2	MCF-7	breast:
24	chr3:146048795..146051583-chr3:146054776..146056566,2	MCF-7	breast:
25	chr3:145979759..145981408-chr3:145991775..145993643,2	K562	blood:
26	chr3:145979759..145981408-chr3:145991775..145993643,2	K562	blood:
27	chr3:145956753..145960171-chr3:145962648..145965540,3	K562	blood:
28	chr3:146048795..146051583-chr3:146054776..146056566,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000243596	TF binding region
PLSCR4	TF binding region
ENSG00000243596	CpG island
PLSCR4	CpG island
ENSG00000114698	chromatin interactions
ENSG00000152952	chromatin interactions

Extended variants
information (count: 4333 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:4333 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs76197285	chr3:145960955-145960956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs562208348	chr3:145961023-145961024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs375026381	chr3:145961024-145961025	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs11300769	chr3:145961026-145961027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs529609755	chr3:145961037-145961038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs189290001	chr3:145961093-145961094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs577125698	chr3:145961153-145961154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs566313792	chr3:145961157-145961158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs78768142	chr3:145961174-145961175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs544400945	chr3:145961175-145961176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs56989399	chr3:145961181-145961182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs180929230	chr3:145961215-145961216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs570138584	chr3:145961233-145961234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs1512078	chr3:145961239-145961240	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs369109675	chr3:145961252-145961253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs186344798	chr3:145961274-145961275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs534635098	chr3:145961278-145961279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552740284	chr3:145961279-145961280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs75085542	chr3:145961282-145961283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs1512079	chr3:145961296-145961297	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs111687449	chr3:145961342-145961343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs528059015	chr3:145961368-145961369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs546629806	chr3:145961397-145961398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs74328588	chr3:145961398-145961399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs1512080	chr3:145961412-145961413	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs538974245	chr3:145961419-145961420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs367712435	chr3:145961434-145961435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs79250903	chr3:145961495-145961496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs74949294	chr3:145961546-145961547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs191135058	chr3:145961547-145961548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs548153129	chr3:145961566-145961567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs147080696	chr3:145961579-145961580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs181539177	chr3:145961590-145961591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs35723694	chr3:145961603-145961604	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs570020026	chr3:145961667-145961668	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs75095835	chr3:145961674-145961675	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs76493544	chr3:145961747-145961748	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs369956947	chr3:145961756-145961757	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs116314882	chr3:145961773-145961774	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs386666795	chr3:145961795-145961796	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs115505549	chr3:145961797-145961798	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs538408695	chr3:145961820-145961821	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs557137824	chr3:145961848-145961849	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs77506954	chr3:145961855-145961856	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs542740026	chr3:145961860-145961861	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs554261031	chr3:145961865-145961866	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs572925445	chr3:145961907-145961908	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs540239678	chr3:145961916-145961917	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs536465722	chr3:145961923-145961924	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs72992934	chr3:145961939-145961940	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	21115979	CNVD
Colorectal cancer	18645599	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Hepatocellular carcinoma	16750200	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Blepharophimosis-ptosis-epicanthus inversus syndrome	22067867	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Autism	18923514	CNVD
Autism	22241247	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Autism	21956041	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Breast cancer	16608533	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	21509527	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:981 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:145948000-145967800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr3:145953200-145968000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr3:145954600-145962600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr3:145954600-145967800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr3:145955200-145962400	Weak transcription	Fetal Lung	lung
6	chr3:145956200-145964600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr3:145956800-145966600	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr3:145958000-145965400	Weak transcription	Adipose Nuclei	Adipose
9	chr3:145958000-145966000	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr3:145959400-145962800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:145959400-145966400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr3:145960000-145966400	Weak transcription	Ovary	ovary
13	chr3:145960200-145967800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr3:145960400-145963800	Weak transcription	HUVEC	blood vessel
15	chr3:145960400-145965400	Weak transcription	Fetal Stomach	stomach
16	chr3:145960400-145967800	Weak transcription	Fetal Intestine Large	intestine
17	chr3:145960600-145961800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr3:145960600-145962200	Weak transcription	NHDF-Ad	bronchial
19	chr3:145960800-145963800	Weak transcription	Colon Smooth Muscle	Colon
20	chr3:145960800-145967800	Weak transcription	Primary hematopoietic stem cells	blood
21	chr3:145960800-145967800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr3:145961400-145961800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr3:145961600-145961800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr3:145961600-145962200	Enhancers	Pancreatic Islets	Pancreatic Islet
25	chr3:145961800-145962200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr3:145961800-145962600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr3:145961800-145966200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr3:145962200-145962800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
29	chr3:145962200-145963000	Enhancers	NHDF-Ad	bronchial
30	chr3:145962200-145965800	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr3:145962400-145962800	Strong transcription	Fetal Lung	lung
32	chr3:145962600-145962800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr3:145962600-145963000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr3:145962600-145966200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr3:145962800-145963000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
36	chr3:145962800-145963000	Enhancers	Aorta	Aorta
37	chr3:145962800-145963000	Genic enhancers	Fetal Lung	lung
38	chr3:145962800-145963200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr3:145963000-145963600	Weak transcription	Fetal Lung	lung
40	chr3:145963000-145965400	Weak transcription	Aorta	Aorta
41	chr3:145963000-145966200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr3:145963000-145966200	Weak transcription	NHDF-Ad	bronchial
43	chr3:145963000-145967800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr3:145963200-145965800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr3:145963600-145963800	Weak transcription	Sigmoid Colon	Sigmoid Colon
46	chr3:145963600-145966200	Enhancers	Fetal Lung	lung
47	chr3:145963800-145964000	Enhancers	Sigmoid Colon	Sigmoid Colon
48	chr3:145963800-145964000	Enhancers	HUVEC	blood vessel
49	chr3:145963800-145964800	Enhancers	Colon Smooth Muscle	Colon
50	chr3:145964000-145964200	Flanking Active TSS	HUVEC	blood vessel

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links