Variant report

Variant nsv998769
Chromosome Location chr4:48989185-49083089
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:141 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48987600-48989200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr4:48987600-48989200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr4:48987800-48989800 Active TSS Rectal Smooth Muscle rectum
4 chr4:48988000-48989200 Active TSS Rectal Mucosa Donor 29 rectum
5 chr4:48988200-48989200 Bivalent/Poised TSS NHEK skin
6 chr4:48988200-48990000 Active TSS Colonic Mucosa Colon
7 chr4:48988600-49000400 Weak transcription Gastric stomach
8 chr4:48989000-48990200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
9 chr4:48989000-48990200 Enhancers Stomach Mucosa stomach
10 chr4:48989000-48993400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr4:48989000-49000400 Weak transcription Esophagus oesophagus
12 chr4:48989200-48989600 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
13 chr4:48989200-48990000 Active TSS NHEK skin
14 chr4:48989200-48990600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:48989600-48990000 Active TSS Rectal Mucosa Donor 29 rectum
16 chr4:48990000-48990200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
17 chr4:48990000-48993000 Weak transcription NHEK skin
18 chr4:48990200-48990600 Weak transcription Stomach Mucosa stomach
19 chr4:48990200-48991200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr4:48990200-48991400 Enhancers Rectal Mucosa Donor 29 rectum
21 chr4:48990600-48991400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr4:48990600-48992800 Enhancers Stomach Mucosa stomach
23 chr4:48990800-48991800 Enhancers Sigmoid Colon Sigmoid Colon
24 chr4:48991200-48994000 Enhancers Rectal Mucosa Donor 31 rectum
25 chr4:48991400-48991600 Bivalent Enhancer Aorta Aorta
26 chr4:48991400-48992800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr4:48991400-49018400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr4:48991800-48993000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr4:48992800-48993000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr4:48993000-48993400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:48993000-48993600 Enhancers Sigmoid Colon Sigmoid Colon
32 chr4:48993000-48993800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr4:48993000-48995200 Enhancers NHEK skin
34 chr4:48993400-48993600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr4:48993400-48993600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr4:48993600-48994000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:48993600-48994800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:48993600-49017400 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr4:48994000-48994800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:48994000-48996800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr4:48994400-48995400 Enhancers Stomach Smooth Muscle stomach
42 chr4:48994800-48995400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr4:48994800-48995600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr4:48994800-48995600 Enhancers Hela-S3 cervix
45 chr4:48995400-48995600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr4:48995600-48996000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr4:48996000-48996200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:48996200-48997200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:48996800-48997200 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr4:48997200-49000400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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