Variant report

Variant	nsv998804
Chromosome Location	chr1:242281003-242491362
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1137)
CpG islands
(count:183)
Chromatin interactive
region (count:25)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1137 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:242374596-242374843	HepG2	liver:	n/a	n/a
2	ATF1	chr1:242287641-242287643	K562	blood:	n/a	n/a
3	ATF1	chr1:242292439-242292709	K562	blood:	n/a	n/a
4	ATF1	chr1:242446572-242446576	K562	blood:	n/a	n/a
5	ATF2	chr1:242292396-242292783	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr1:242349067-242349387	GM12878	blood:	n/a	n/a
7	ATF2	chr1:242388834-242389344	GM12878	blood:	n/a	n/a
8	ATF2	chr1:242343090-242343519	GM12878	blood:	n/a	n/a
9	ATF2	chr1:242388576-242389413	GM12878	blood:	n/a	n/a
10	ATF2	chr1:242292342-242292767	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF3	chr1:242388796-242389447	A549	lung:	n/a	n/a
12	ATF3	chr1:242388881-242389752	A549	lung:	n/a	n/a
13	BACH1	chr1:242310477-242310677	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr1:242284461-242284512	K562	blood:	n/a	n/a
15	BACH1	chr1:242359546-242359693	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr1:242388281-242389342	GM12878	blood:	n/a	n/a
17	BATF	chr1:242406021-242406263	GM12878	blood:	n/a	n/a
18	BATF	chr1:242349079-242349337	GM12878	blood:	n/a	n/a
19	BATF	chr1:242343038-242343433	GM12878	blood:	n/a	n/a
20	BATF	chr1:242404324-242404602	GM12878	blood:	n/a	n/a
21	BATF	chr1:242388659-242388935	GM12878	blood:	n/a	n/a
22	BATF	chr1:242343107-242343366	GM12878	blood:	n/a	n/a
23	BATF	chr1:242321944-242322206	GM12878	blood:	n/a	chr1:242322107-242322118
24	BATF	chr1:242349064-242349300	GM12878	blood:	n/a	n/a
25	BCL11A	chr1:242342327-242342487	H1-hESC	embryonic stem cell:	n/a	n/a
26	BCL11A	chr1:242343069-242343372	GM12878	blood:	n/a	n/a
27	BCL11A	chr1:242349063-242349337	GM12878	blood:	n/a	n/a
28	BCL11A	chr1:242342269-242342637	H1-hESC	embryonic stem cell:	n/a	n/a
29	BCL11A	chr1:242388333-242389298	GM12878	blood:	n/a	n/a
30	BCL3	chr1:242388790-242389876	A549	lung:	n/a	n/a
31	BCL3	chr1:242349075-242349372	GM12878	blood:	n/a	n/a
32	BCL3	chr1:242403292-242403905	A549	lung:	n/a	n/a
33	BCL3	chr1:242382595-242383234	A549	lung:	n/a	n/a
34	BCL3	chr1:242400192-242400753	A549	lung:	n/a	n/a
35	BCL3	chr1:242402519-242403128	A549	lung:	n/a	n/a
36	BCL3	chr1:242388773-242389831	A549	lung:	n/a	n/a
37	BCL3	chr1:242349126-242349356	GM12878	blood:	n/a	n/a
38	BCLAF1	chr1:242343127-242343435	GM12878	blood:	n/a	n/a
39	BHLHE40	chr1:242404187-242404315	A549	lung:	n/a	n/a
40	BHLHE40	chr1:242349123-242349320	GM12878	blood:	n/a	n/a
41	BHLHE40	chr1:242388832-242389221	A549	lung:	n/a	n/a
42	BHLHE40	chr1:242343148-242343446	GM12878	blood:	n/a	n/a
43	BHLHE40	chr1:242389571-242389733	A549	lung:	n/a	n/a
44	BHLHE40	chr1:242388236-242389300	GM12878	blood:	n/a	n/a
45	BRCA1	chr1:242348099-242348211	Hela-S3	cervix:	n/a	n/a
46	BRCA1	chr1:242353096-242353193	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr1:242310306-242310848	A549	lung:	n/a	n/a
48	CEBPB	chr1:242369212-242369505	HepG2	liver:	n/a	chr1:242369363-242369374
49	CEBPB	chr1:242310176-242310905	A549	lung:	n/a	n/a
50	CEBPB	chr1:242292515-242292655	A549	lung:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:242349206-242349256	A549	lung:	n/a
2	chr1:242310145-242310195	AG09309	skin:	n/a
3	chr1:242310145-242310195	AG04449	skin:	fetal
4	chr1:242407965-242408015	Jurkat	blood:	n/a
5	chr1:242310145-242310195	HRE	kidney:	n/a
6	chr1:242349206-242349256	Hela-S3	cervix:	n/a
7	chr1:242407965-242408015	GM12892	blood:	n/a
8	chr1:242407965-242408015	AG09319	gingival:	n/a
9	chr1:242310145-242310195	Jurkat	blood:	n/a
10	chr1:242407965-242408015	NHDF-neo	bronchial:	n/a
11	chr1:242407965-242408015	HRE	kidney:	n/a
12	chr1:242310145-242310195	HAEpiC	amniotic membrane:	n/a
13	chr1:242310145-242310195	HIPEpiC	eye:	n/a
14	chr1:242310145-242310195	GM12878	blood:	n/a
15	chr1:242407965-242408015	HL-60	blood:	n/a
16	chr1:242310145-242310195	CMK	blood:	n/a
17	chr1:242349206-242349256	PFSK-1	brain:	n/a
18	chr1:242407965-242408015	BJ	skin:	n/a
19	chr1:242407965-242408015	HCPEpiC	choroid plexus:	n/a
20	chr1:242407965-242408015	AG09309	skin:	n/a
21	chr1:242310145-242310195	BE2_C	brain:	n/a
22	chr1:242407965-242408015	SKMC	muscle:	n/a
23	chr1:242310145-242310195	GM06990	blood:	n/a
24	chr1:242310145-242310195	HEK293	kidney:	embryo
25	chr1:242407965-242408015	PFSK-1	brain:	n/a
26	chr1:242310145-242310195	U87	brain:	n/a
27	chr1:242310145-242310195	BJ	skin:	n/a
28	chr1:242349206-242349256	GM19239	blood:	n/a
29	chr1:242349206-242349256	HEK293	kidney:	embryo
30	chr1:242310145-242310195	HPAEpiC	pulmonary alveolar:	n/a
31	chr1:242349206-242349256	PrEC	prostate:	n/a
32	chr1:242310145-242310195	HRCEpiC	kidney:	n/a
33	chr1:242407965-242408015	GM06990	blood:	n/a
34	chr1:242407965-242408015	NH-A	brain:	n/a
35	chr1:242310145-242310195	SK-N-MC	brain:	n/a
36	chr1:242349206-242349256	HMEC	breast:	n/a
37	chr1:242349206-242349256	ECC-1	luminal epithelium:	n/a
38	chr1:242310145-242310195	NHBE	bronchial:	n/a
39	chr1:242407965-242408015	MCF-7	breast:	n/a
40	chr1:242349206-242349256	MCF-7	breast:	n/a
41	chr1:242349206-242349256	NH-A	brain:	n/a
42	chr1:242349206-242349256	HPAEpiC	pulmonary alveolar:	n/a
43	chr1:242407965-242408015	MCF10A-Er-Src	breast:	n/a
44	chr1:242407965-242408015	SK-N-SH	brain:	n/a
45	chr1:242310145-242310195	MCF-7	breast:	n/a
46	chr1:242310145-242310195	LNCaP	prostate:	n/a
47	chr1:242349206-242349256	Hepatocyte	liver:	n/a
48	chr1:242407965-242408015	H1-hESC	embryonic stem cell:	embryo
49	chr1:242349206-242349256	HCF	heart:	n/a
50	chr1:242407965-242408015	NHBE	bronchial:	n/a

(count:25 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:242386329..242394751-chr1:242400505..242406264,14	MCF-7	breast:
2	chr1:242389704..242391777-chr1:242398206..242400493,2	MCF-7	breast:
3	chr1:242182508..242183674-chr1:242292156..242293080,6	MCF-7	breast:
4	chr1:242406233..242408246-chr9:132407483..132409286,2	MCF-7	breast:
5	chr1:242389704..242391777-chr1:242398206..242400493,2	MCF-7	breast:
6	chr1:242286191..242288047-chr1:242289637..242292045,2	MCF-7	breast:
7	chr1:242386329..242394751-chr1:242400505..242406264,14	MCF-7	breast:
8	chr1:242292163..242292685-chr1:242427746..242428399,2	MCF-7	breast:
9	chr1:242387764..242390407-chr1:242402354..242404271,2	MCF-7	breast:
10	chr1:242391078..242393994-chr1:242400532..242402994,2	MCF-7	breast:
11	chr1:242353836..242355949-chr1:242363634..242366630,2	K562	blood:
12	chr1:242391078..242393994-chr1:242400532..242402994,2	MCF-7	breast:
13	chr1:242286116..242287870-chr1:242290000..242292729,2	K562	blood:
14	chr1:242387764..242390407-chr1:242402354..242404271,2	MCF-7	breast:
15	chr1:242363202..242365570-chr1:242368002..242370016,2	K562	blood:
16	chr1:242353836..242355949-chr1:242363634..242366630,2	K562	blood:
17	chr1:242363202..242365570-chr1:242368002..242370016,2	K562	blood:
18	chr1:242292163..242292685-chr1:242427746..242428399,2	MCF-7	breast:
19	chr1:242334854..242337802-chr1:242340893..242343109,2	MCF-7	breast:
20	chr1:242286191..242288047-chr1:242289637..242292045,2	MCF-7	breast:
21	chr1:242388720..242391190-chr1:242392275..242394962,3	MCF-7	breast:
22	chr1:242334854..242337802-chr1:242340893..242343109,2	MCF-7	breast:
23	chr1:242344558..242347409-chr1:242350180..242352444,2	MCF-7	breast:
24	chr1:242286116..242287870-chr1:242290000..242292729,2	K562	blood:
25	chr1:242388720..242391190-chr1:242392275..242394962,3	MCF-7	breast:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EXO1-2	chr1:242372565-242372637	ENSG00000224525.1
2	lnc-EXO1-10	chr1:242341597-242341667	ENSG00000272865.1
3	lnc-MAP1LC3C-1	chr1:242372520-242372637	ENSG00000232689.1
4	lnc-MAP1LC3C-1	chr1:242366857-242367045	ENSG00000232689.1
5	lnc-EXO1-2	chr1:242373671-242374129	ENSG00000224525.2
6	lnc-MAP1LC3C-1	chr1:242373671-242373825	ENSG00000232689.1
7	lnc-EXO1-10	chr1:242341031-242341205	ENSG00000272865.1
8	lnc-EXO1-10	chr1:242355457-242355606	ENSG00000272865.1
9	lnc-EXO1-9	chr1:242337290-242337520	NONHSAT010562
10	lnc-EXO1-2	chr1:242366857-242367045	ENSG00000224525.2
11	lnc-EXO1-10	chr1:242372394-242372431	ENSG00000272865.1
12	lnc-EXO1-10	chr1:242310816-242310856	ENSG00000272865.1
13	lnc-EXO1-2	chr1:242372520-242372637	ENSG00000224525.2
14	lnc-EXO1-9	chr1:242338601-242338936	NONHSAT010562
15	lnc-EXO1-2	chr1:242373671-242374129	ENSG00000224525.1

No data

Variant related genes	Relation type
RNA5SP81	TF binding region
ENSG00000272865	TF binding region
RN7SKP12	TF binding region
PLD5	TF binding region
ENSG00000224525	TF binding region
RNA5SP81	CpG island
ENSG00000272865	CpG island
RN7SKP12	CpG island
PLD5	CpG island
ENSG00000224525	CpG island
ENSG00000252084	chromatin interactions

Extended variants
information (count: 9264 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:9264 , 50 per page) page: 1 2 3 4 5 6 7 ... 186

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2574669	chr1:242281003-242281004	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs530190140	chr1:242281033-242281034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs376344064	chr1:242281050-242281051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs36028930	chr1:242281051-242281052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs386641233	chr1:242281054-242281055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs201345884	chr1:242281055-242281056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs532868565	chr1:242281056-242281057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs552858368	chr1:242281062-242281063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs567427302	chr1:242281063-242281064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs188258303	chr1:242281077-242281078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs192782240	chr1:242281080-242281081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs555129965	chr1:242281104-242281105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs9659171	chr1:242281125-242281126	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs58670868	chr1:242281171-242281172	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs184914006	chr1:242281204-242281205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370535723	chr1:242281279-242281280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs200035172	chr1:242281284-242281285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs72503231	chr1:242281286-242281287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs10628286	chr1:242281287-242281288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs200986597	chr1:242281288-242281289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs202038113	chr1:242281290-242281291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs188875691	chr1:242281367-242281368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs558460193	chr1:242281439-242281440	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs1435951	chr1:242281455-242281456	Strong transcription Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs72761232	chr1:242281489-242281490	Strong transcription Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs371083896	chr1:242281557-242281558	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs192237613	chr1:242281636-242281637	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs530154460	chr1:242281640-242281641	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs35215037	chr1:242281671-242281672	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs115654788	chr1:242281739-242281740	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs184772527	chr1:242281740-242281741	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs532597027	chr1:242281811-242281812	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs12746963	chr1:242281817-242281818	Strong transcription Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs569606077	chr1:242281853-242281854	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532013515	chr1:242281865-242281866	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs548511138	chr1:242281866-242281867	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs2800757	chr1:242281976-242281977	Strong transcription Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs535967879	chr1:242282004-242282005	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs553075877	chr1:242282011-242282012	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs140243194	chr1:242282014-242282015	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs78571169	chr1:242282026-242282027	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs189598841	chr1:242282061-242282062	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs554659570	chr1:242282083-242282084	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs575186883	chr1:242282108-242282109	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs537715815	chr1:242282163-242282164	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs371869457	chr1:242282164-242282165	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs554479965	chr1:242282165-242282166	Strong transcription Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs2636254	chr1:242282285-242282286	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs372368963	chr1:242282300-242282301	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs560676000	chr1:242282301-242282302	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Hepatocellular carcinoma	16750200	CNVD
Arrhythmogenic right ventricular cardiomyopathy	17576883	CNVD
Multiple myeloma	16616336	CNVD
Developmental delay	21147756	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Pancreatic cancer	17952125	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1014 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:242254000-242282200	Weak transcription	Brain Hippocampus Middle	brain
2	chr1:242270200-242281400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:242270400-242281400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr1:242270600-242286600	Weak transcription	Aorta	Aorta
5	chr1:242271600-242287600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr1:242277400-242286800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr1:242281400-242282200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr1:242281400-242282400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr1:242281400-242283200	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr1:242282200-242282400	Enhancers	Brain Hippocampus Middle	brain
11	chr1:242282200-242298600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr1:242285000-242289800	Weak transcription	HMEC	breast
13	chr1:242286600-242287400	Strong transcription	Aorta	Aorta
14	chr1:242286800-242287800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr1:242287200-242288400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr1:242287400-242288800	Weak transcription	Aorta	Aorta
17	chr1:242287800-242289400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr1:242291600-242292000	Enhancers	Brain Angular Gyrus	brain
19	chr1:242292000-242292400	Weak transcription	Brain Angular Gyrus	brain
20	chr1:242292200-242292600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr1:242292400-242292600	Enhancers	Brain Angular Gyrus	brain
22	chr1:242292600-242295800	Weak transcription	Brain Angular Gyrus	brain
23	chr1:242292800-242294400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr1:242294400-242295800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr1:242295800-242296000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr1:242295800-242296200	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr1:242296000-242296200	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr1:242296200-242296400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr1:242296400-242296800	Enhancers	GM12878-XiMat	blood
30	chr1:242296800-242297000	Weak transcription	GM12878-XiMat	blood
31	chr1:242296800-242297200	Enhancers	Monocytes-CD14+_RO01746	blood
32	chr1:242296800-242298000	Enhancers	Primary monocytes fromperipheralblood	blood
33	chr1:242297000-242297400	Enhancers	GM12878-XiMat	blood
34	chr1:242297200-242302400	Weak transcription	Monocytes-CD14+_RO01746	blood
35	chr1:242297400-242302000	Weak transcription	GM12878-XiMat	blood
36	chr1:242298000-242302200	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr1:242298600-242298800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr1:242298600-242299000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr1:242298800-242303800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr1:242299000-242310400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr1:242299800-242301200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr1:242300000-242303600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr1:242300800-242301600	Enhancers	Brain Germinal Matrix	brain
44	chr1:242301200-242302000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr1:242301800-242303200	Enhancers	Brain Hippocampus Middle	brain
46	chr1:242301800-242303200	Enhancers	Brain Substantia Nigra	brain
47	chr1:242302000-242302400	Enhancers	Brain Angular Gyrus	brain
48	chr1:242302000-242302400	Enhancers	Brain Inferior Temporal Lobe	brain
49	chr1:242302000-242302800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr1:242302000-242302800	Enhancers	Brain Cingulate Gyrus	brain

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