Variant report

Variant nsv998873
Chromosome Location chr1:152869127-152975258
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:342 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152861400-152873800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:152871600-152872600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:152872600-152876600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:152873400-152874200 Enhancers GM12878-XiMat blood
5 chr1:152873400-152874800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:152873800-152874200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:152873800-152874800 Enhancers Placenta Amnion Placenta Amnion
8 chr1:152873800-152874800 Enhancers NHEK skin
9 chr1:152874000-152874800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:152874000-152876000 Enhancers Esophagus oesophagus
11 chr1:152874200-152876400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:152874200-152876600 Weak transcription GM12878-XiMat blood
13 chr1:152874800-152876600 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:152874800-152876600 Weak transcription NHEK skin
15 chr1:152874800-152876800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:152874800-152877200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:152875600-152875800 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr1:152875800-152876600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:152876000-152878200 Weak transcription Esophagus oesophagus
20 chr1:152876400-152878600 Enhancers HMEC breast
21 chr1:152876400-152882600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:152876600-152876800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:152876600-152876800 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr1:152876600-152878200 Enhancers NHEK skin
25 chr1:152876600-152878400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:152876600-152880800 Enhancers GM12878-XiMat blood
27 chr1:152876600-152881800 Enhancers Placenta Amnion Placenta Amnion
28 chr1:152876800-152877600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:152876800-152878600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:152877200-152878200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:152877200-152879600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:152877400-152878200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:152877400-152879600 Enhancers Muscle Satellite Cultured Cells --
34 chr1:152877600-152878200 Enhancers NHDF-Ad bronchial
35 chr1:152877600-152879200 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr1:152877600-152879600 Enhancers NHLF lung
37 chr1:152877800-152879200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:152878200-152878600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr1:152878200-152878600 Enhancers Osteobl bone
40 chr1:152878200-152879000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:152878200-152879000 Enhancers HSMMtube muscle
42 chr1:152878200-152879200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:152878200-152879200 Enhancers Esophagus oesophagus
44 chr1:152878200-152879200 Flanking Active TSS NHDF-Ad bronchial
45 chr1:152878200-152879200 Flanking Active TSS NHEK skin
46 chr1:152878200-152879400 Enhancers HSMM muscle
47 chr1:152878400-152879000 Enhancers NH-A brain
48 chr1:152878400-152879200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:152878600-152878800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:152878600-152878800 Flanking Active TSS HMEC breast

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