Variant report

Variant	nsv998885
Chromosome Location	chr2:40123904-40182851
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:40140743-40141194	HepG2	liver:	n/a	n/a
2	BACH1	chr2:40149983-40150021	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCLAF1	chr2:40140740-40141114	GM12878	blood:	n/a	n/a
4	CEBPB	chr2:40140796-40141140	A549	lung:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
5	CEBPB	chr2:40140795-40141098	K562	blood:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
6	CEBPB	chr2:40140766-40141153	MCF-7	breast:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
7	CEBPB	chr2:40132841-40132864	HepG2	liver:	n/a	n/a
8	CEBPB	chr2:40140785-40141280	IMR90	lung:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
9	CEBPB	chr2:40157413-40157574	IMR90	lung:	n/a	n/a
10	CEBPB	chr2:40140745-40141199	MCF-7	breast:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
11	CEBPB	chr2:40140744-40141140	Hela-S3	cervix:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
12	CEBPB	chr2:40144232-40144363	A549	lung:	n/a	n/a
13	CEBPB	chr2:40140765-40141163	H1-hESC	embryonic stem cell:	n/a	chr2:40140980-40140993 chr2:40140982-40140993 chr2:40140982-40140993
14	CHD1	chr2:40140686-40141899	IMR90	lung:	n/a	n/a
15	CTCF	chr2:40140840-40140990	HCPEpiC	choroid plexus:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
16	CTCF	chr2:40140500-40140650	GM12873	blood:	n/a	n/a
17	CTCF	chr2:40140860-40141010	AG04450	lung:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
18	CTCF	chr2:40140737-40141048	Spleen_OC	spleen:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
19	CTCF	chr2:40140820-40140970	HMF	breast:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
20	CTCF	chr2:40140820-40140970	AG09309	skin:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
21	CTCF	chr2:40140840-40140990	GM12871	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
22	CTCF	chr2:40140940-40141090	A549	lung:	n/a	n/a
23	CTCF	chr2:40140820-40140970	GM12868	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
24	CTCF	chr2:40140900-40141050	HAc	cerebellar:	n/a	n/a
25	CTCF	chr2:40140820-40140970	HCPEpiC	choroid plexus:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
26	CTCF	chr2:40140780-40140930	HPF	lung:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
27	CTCF	chr2:40140774-40141021	Pancreas_OC	pancreas:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
28	CTCF	chr2:40140728-40141087	H1-hESC	embryonic stem cell:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
29	CTCF	chr2:40140818-40140968	A549	lung:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
30	CTCF	chr2:40140820-40140970	Hela-S3	cervix:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
31	CTCF	chr2:40140820-40140970	NHEK	skin:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
32	CTCF	chr2:40140755-40141065	K562	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
33	CTCF	chr2:40140820-40140970	HMEC	breast:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
34	CTCF	chr2:40140840-40140990	HPAF	blood vessel:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
35	CTCF	chr2:40140820-40140970	K562	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
36	CTCF	chr2:40140580-40140730	SAEC	small airway:	n/a	n/a
37	CTCF	chr2:40140800-40140950	MCF-7	breast:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
38	CTCF	chr2:40140820-40140970	AoAF	blood vessel:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
39	CTCF	chr2:40140760-40141018	Lung_OC	lung:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
40	CTCF	chr2:40141700-40141850	AG10803	skin:	n/a	n/a
41	CTCF	chr2:40141740-40141890	AG04450	lung:	n/a	n/a
42	CTCF	chr2:40140851-40140935	GM19240	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
43	CTCF	chr2:40140768-40141023	MCF-7	breast:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
44	CTCF	chr2:40140779-40141004	GM10248	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
45	CTCF	chr2:40140800-40140950	GM12873	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
46	CTCF	chr2:40140829-40140949	GM19239	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
47	CTCF	chr2:40140820-40140970	NHDF-neo	bronchial:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
48	CTCF	chr2:40140860-40141010	GM12866	blood:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916
49	CTCF	chr2:40140740-40140890	HAc	cerebellar:	n/a	n/a
50	CTCF	chr2:40140820-40140970	SK-N-SH_RA	brain:	n/a	chr2:40140898-40140906 chr2:40140893-40140911 chr2:40140895-40140916

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:40165558-40165608	AoSMC	blood vessel:	n/a
2	chr2:40165558-40165608	AoSMC	blood vessel:	n/a
3	chr2:40149258-40149308	H1-hESC	embryonic stem cell:	embryo
4	chr2:40149258-40149308	SAEC	small airway:	n/a
5	chr2:40140929-40140979	PrEC	prostate:	n/a
6	chr2:40147801-40147851	ProgFib	skin:	n/a
7	chr2:40147801-40147851	HAEpiC	amniotic membrane:	n/a
8	chr2:40140929-40140979	SAEC	small airway:	n/a
9	chr2:40140929-40140979	HCF	heart:	n/a
10	chr2:40140929-40140979	HRE	kidney:	n/a
11	chr2:40140929-40140979	PANC-1	pancreas:	n/a
12	chr2:40140929-40140979	T-47D	breast:	n/a
13	chr2:40165558-40165608	GM12891	blood:	n/a
14	chr2:40140929-40140979	MCF10A-Er-Src	breast:	n/a
15	chr2:40149258-40149308	HCT-116	colon:	n/a
16	chr2:40149258-40149308	T-47D	breast:	n/a
17	chr2:40165558-40165608	GM12878	blood:	n/a
18	chr2:40149258-40149308	ovcar-3	ovarian:	n/a
19	chr2:40165558-40165608	HAEpiC	amniotic membrane:	n/a
20	chr2:40165558-40165608	SK-N-SH_RA	brain:	n/a
21	chr2:40165558-40165608	U87	brain:	n/a
22	chr2:40147801-40147851	HRE	kidney:	n/a
23	chr2:40149258-40149308	HEK293	kidney:	embryo
24	chr2:40149258-40149308	Caco-2	colon:	n/a
25	chr2:40149258-40149308	HRE	kidney:	n/a
26	chr2:40147801-40147851	HEEpiC	esophagus:	n/a
27	chr2:40147801-40147851	HCT-116	colon:	n/a
28	chr2:40149258-40149308	PFSK-1	brain:	n/a
29	chr2:40140929-40140979	IMR90	lung:	fetal
30	chr2:40147801-40147851	K562	blood:	n/a
31	chr2:40147801-40147851	A549	lung:	n/a
32	chr2:40149258-40149308	HMEC	breast:	n/a
33	chr2:40147801-40147851	SKMC	muscle:	n/a
34	chr2:40149258-40149308	IMR90	lung:	fetal
35	chr2:40147801-40147851	MCF10A-Er-Src	breast:	n/a
36	chr2:40140929-40140979	NHDF-neo	bronchial:	n/a
37	chr2:40165558-40165608	CMK	blood:	n/a
38	chr2:40149258-40149308	U87	brain:	n/a
39	chr2:40147801-40147851	RPTEC	kidney:	n/a
40	chr2:40140929-40140979	HAEpiC	amniotic membrane:	n/a
41	chr2:40140929-40140979	BJ	skin:	n/a
42	chr2:40165558-40165608	HIPEpiC	eye:	n/a
43	chr2:40165558-40165608	AG04449	skin:	fetal
44	chr2:40147801-40147851	HL-60	blood:	n/a
45	chr2:40165558-40165608	HRCEpiC	kidney:	n/a
46	chr2:40140929-40140979	NB4	blood:	n/a
47	chr2:40165558-40165608	BJ	skin:	n/a
48	chr2:40147801-40147851	Hepatocyte	liver:	n/a
49	chr2:40140929-40140979	Hepatocyte	liver:	n/a
50	chr2:40149258-40149308	HCM	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr2:40164512..40166990-chr2:40173493..40175018,2	MCF-7	breast:
2	chr2:40127848..40131758-chr2:40131769..40134520,3	K562	blood:
3	chr2:39991894..39993577-chr2:40151910..40153730,2	K562	blood:
4	chr2:40004496..40006686-chr2:40138159..40140367,2	MCF-7	breast:
5	chr2:40140472..40141253-chr2:40471871..40472400,2	MCF-7	breast:
6	chr2:40140455..40141410-chr2:40986765..40987805,5	MCF-7	breast:
7	chr2:40127848..40131758-chr2:40131769..40134520,3	K562	blood:
8	chr2:40164512..40166990-chr2:40173493..40175018,2	MCF-7	breast:
9	chr2:40144153..40146237-chr2:40148819..40150420,2	K562	blood:
10	chr2:40140445..40141319-chr2:41925707..41926458,2	K562	blood:
11	chr2:40140915..40141986-chr2:40781509..40782393,3	MCF-7	breast:
12	chr2:40140525..40141334-chr2:42009019..42009970,2	K562	blood:
13	chr2:40144153..40146237-chr2:40148819..40150420,2	K562	blood:
14	chr2:40140709..40141329-chr2:40986882..40987436,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TMEM178-2	chr2:40149989-40150029	ENSG00000227028.1
2	lnc-TMEM178-2	chr2:40146833-40146923	ENSG00000227028.1
3	lnc-TMEM178-2	chr2:40149990-40150029	NONHSAT070263
4	lnc-TMEM178-2	chr2:40149989-40150029	NONHSAT070261
5	lnc-TMEM178-2	chr2:40144774-40144799	NONHSAT070261

Variant related genes	Relation type
ENSG00000235653	TF binding region
SLC8A1-AS1	TF binding region
ENSG00000235653	CpG island
SLC8A1-AS1	CpG island
ENSG00000138050	chromatin interactions

Extended variants
information (count: 2733 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:2733 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184266100	chr2:40124242-40124243	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs4670297	chr2:40124243-40124244	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs143913209	chr2:40124259-40124260	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs544487414	chr2:40124263-40124264	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs372548862	chr2:40124279-40124280	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs189638895	chr2:40124308-40124309	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs59680537	chr2:40124349-40124350	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs181227655	chr2:40124364-40124365	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs17540476	chr2:40124375-40124376	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs371934781	chr2:40124385-40124386	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs59363881	chr2:40124412-40124413	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs146561858	chr2:40124436-40124437	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs542199050	chr2:40124459-40124460	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs565109432	chr2:40124482-40124483	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs117270422	chr2:40124488-40124489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs550822639	chr2:40124563-40124564	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs563042829	chr2:40124591-40124592	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs146322494	chr2:40124595-40124596	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs114954528	chr2:40124631-40124632	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs548332646	chr2:40124632-40124633	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs72931476	chr2:40124682-40124683	Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs575315727	chr2:40124688-40124689	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs547219997	chr2:40124779-40124780	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs185737159	chr2:40124791-40124792	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs552725448	chr2:40124792-40124793	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs546012506	chr2:40124817-40124818	Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs188884385	chr2:40124844-40124845	Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs548653420	chr2:40124849-40124850	Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs538045194	chr2:40124883-40124884	Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs371797293	chr2:40124938-40124939	Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs59019191	chr2:40124959-40124960	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs535417154	chr2:40125013-40125014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs553516737	chr2:40125022-40125023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs572029805	chr2:40125023-40125024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs545458659	chr2:40125028-40125029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs563848239	chr2:40125035-40125036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs181660251	chr2:40125036-40125037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs569514923	chr2:40125085-40125086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs75630481	chr2:40125157-40125158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs563185840	chr2:40125160-40125161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs372180214	chr2:40125162-40125163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs371922408	chr2:40125182-40125183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs138787886	chr2:40125188-40125189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs376893923	chr2:40125218-40125219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs77718626	chr2:40125229-40125230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs4670983	chr2:40125240-40125241	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs552660366	chr2:40125241-40125242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs76814079	chr2:40125269-40125270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs79451818	chr2:40125273-40125274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs377481940	chr2:40125314-40125315	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	22495311	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Non-small cell lung cancer	18927303	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Breast cancer	21364760	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:313 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:40124200-40124600	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr2:40124600-40124800	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr2:40124800-40125000	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr2:40125000-40128600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr2:40125600-40126600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr2:40125800-40126600	Enhancers	HUVEC	blood vessel
7	chr2:40126200-40126400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr2:40126400-40128800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr2:40128600-40129000	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr2:40128800-40129000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr2:40129000-40129800	Enhancers	Muscle Satellite Cultured Cells	--
12	chr2:40129000-40130000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr2:40129000-40130000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr2:40129200-40129600	Enhancers	NHDF-Ad	bronchial
15	chr2:40129200-40129800	Enhancers	Osteobl	bone
16	chr2:40129200-40130000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr2:40132600-40133000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr2:40135800-40136200	Enhancers	Dnd41	blood
19	chr2:40136000-40136200	Enhancers	Esophagus	oesophagus
20	chr2:40136200-40140600	Weak transcription	Dnd41	blood
21	chr2:40137800-40138400	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr2:40137800-40138400	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chr2:40138000-40138400	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr2:40138200-40138600	Enhancers	HUES64 Cell Line	embryonic stem cell
25	chr2:40138400-40150400	Weak transcription	HUES6 Cell Line	embryonic stem cell
26	chr2:40138400-40150800	Weak transcription	HUES48 Cell Line	embryonic stem cell
27	chr2:40138600-40141000	Weak transcription	HUES64 Cell Line	embryonic stem cell
28	chr2:40139400-40140000	Enhancers	Thymus	Thymus
29	chr2:40140000-40141000	Weak transcription	Thymus	Thymus
30	chr2:40140000-40141800	Enhancers	Fetal Thymus	thymus
31	chr2:40140600-40141400	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr2:40140600-40146800	Enhancers	Dnd41	blood
33	chr2:40141000-40141200	Flanking Active TSS	Fetal Lung	lung
34	chr2:40141000-40141200	Active TSS	Stomach Smooth Muscle	stomach
35	chr2:40141000-40141400	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr2:40141000-40141400	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr2:40141000-40141400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr2:40141000-40141400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr2:40141000-40141400	Enhancers	Colon Smooth Muscle	Colon
40	chr2:40141000-40141400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
41	chr2:40141000-40141400	Enhancers	Fetal Brain Male	brain
42	chr2:40141000-40141400	Enhancers	Fetal Intestine Small	intestine
43	chr2:40141000-40141400	Enhancers	Fetal Muscle Leg	muscle
44	chr2:40141000-40141400	Enhancers	Left Ventricle	heart
45	chr2:40141000-40141400	Enhancers	Pancreas	Pancrea
46	chr2:40141000-40141400	Enhancers	HMEC	breast
47	chr2:40141000-40141400	Enhancers	NH-A	brain
48	chr2:40141000-40141400	Enhancers	NHDF-Ad	bronchial
49	chr2:40141000-40141400	Enhancers	NHLF	lung
50	chr2:40141000-40141600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links