Variant report

Variant	rs1000326
Chromosome Location	chr3:111734945-111734946
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12490324	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12492190	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2165787	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4682073	0.92[YRI][hapmap]
rs4682329	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7651142	0.85[YRI][hapmap]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:111720200-111752800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:111730400-111735600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr3:111731000-111736000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:111731000-111739200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr3:111732400-111736000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr3:111732400-111737200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr3:111732600-111736400	Weak transcription	Pancreas	Pancrea
8	chr3:111732600-111738000	Weak transcription	Adipose Nuclei	Adipose
9	chr3:111732600-111741600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr3:111733800-111739200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr3:111734000-111739200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:111734200-111735000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr3:111734200-111735400	Enhancers	Fetal Lung	lung
14	chr3:111734400-111735400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr3:111734400-111735400	Enhancers	Fetal Brain Female	brain
16	chr3:111734400-111735600	Enhancers	Cortex derived primary cultured neurospheres	brain
17	chr3:111734400-111735800	Enhancers	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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