The 2.0 version of rSNPBase

Variant report

Variant rs10005943
Chromosome Location chr4:54210360-54210361
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54169800-54216200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:54170600-54230600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:54172600-54215400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr4:54174200-54212600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr4:54180000-54212800 Weak transcription Primary B cells from cord blood blood
6 chr4:54187800-54212800 Weak transcription Dnd41 blood
7 chr4:54188200-54213800 Weak transcription Right Ventricle heart
8 chr4:54188200-54218200 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr4:54188200-54231200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr4:54188400-54212800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr4:54188600-54215400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr4:54189600-54212800 Weak transcription Osteobl bone
13 chr4:54190000-54213800 Weak transcription HUVEC blood vessel
14 chr4:54192200-54212600 Weak transcription NHDF-Ad bronchial
15 chr4:54192200-54212800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr4:54193800-54212600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr4:54193800-54213400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr4:54201200-54220000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:54201400-54215600 Weak transcription Primary T cells fromperipheralblood blood
20 chr4:54201600-54213000 Weak transcription K562 blood
21 chr4:54201800-54215800 Weak transcription Primary B cells from peripheral blood blood
22 chr4:54202000-54212800 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr4:54202200-54226000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr4:54202600-54213000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr4:54203400-54213000 Weak transcription Primary T cells from cord blood blood
26 chr4:54204200-54213800 Weak transcription Gastric stomach
27 chr4:54204600-54211600 Weak transcription Duodenum Mucosa Duodenum
28 chr4:54205200-54213400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr4:54206000-54212800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr4:54206600-54212200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr4:54206600-54220200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr4:54207000-54211600 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr4:54207000-54213200 Weak transcription GM12878-XiMat blood
34 chr4:54207000-54213400 Weak transcription Lung lung
35 chr4:54209200-54215400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr4:54209600-54213200 Weak transcription Primary monocytes fromperipheralblood blood
37 chr4:54210200-54212600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015