The 2.0 version of rSNPBase

Variant report

Variant rs10012753
Chromosome Location chr4:106886993-106886994
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106843600-106888400 Weak transcription Pancreas Pancrea
2 chr4:106868400-106892000 Weak transcription Duodenum Mucosa Duodenum
3 chr4:106872200-106888400 Weak transcription Lung lung
4 chr4:106873000-106888400 Weak transcription Fetal Muscle Trunk muscle
5 chr4:106878000-106887000 Weak transcription Psoas Muscle Psoas
6 chr4:106878000-106888400 Weak transcription Ovary ovary
7 chr4:106878600-106887000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr4:106879000-106887200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr4:106879000-106888200 Weak transcription Fetal Muscle Leg muscle
10 chr4:106879200-106888200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:106881000-106890400 Weak transcription Small Intestine intestine
12 chr4:106884800-106888400 Weak transcription Right Atrium heart
13 chr4:106885000-106888200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:106885200-106887000 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr4:106885400-106887000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr4:106885400-106887000 Weak transcription Muscle Satellite Cultured Cells --
17 chr4:106885400-106887000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr4:106885400-106887800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr4:106885400-106888200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr4:106885400-106888400 Weak transcription Left Ventricle heart
21 chr4:106885400-106888400 Weak transcription Right Ventricle heart
22 chr4:106885400-106909800 Weak transcription Aorta Aorta
23 chr4:106885600-106887000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr4:106885600-106891600 Weak transcription Fetal Intestine Small intestine
25 chr4:106885600-106894000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr4:106886400-106887200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr4:106886400-106887200 Flanking Active TSS NHEK skin
28 chr4:106886600-106887200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:106886600-106887200 Enhancers Rectal Mucosa Donor 31 rectum
30 chr4:106886600-106887200 Enhancers A549 lung
31 chr4:106886600-106887400 Enhancers HMEC breast
32 chr4:106886600-106887400 Enhancers NHDF-Ad bronchial
33 chr4:106886600-106887600 Enhancers Fetal Intestine Large intestine
34 chr4:106886600-106888000 Enhancers Fetal Kidney kidney
35 chr4:106886600-106888200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr4:106886600-106888200 Enhancers Hela-S3 cervix
37 chr4:106886600-106888600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:106886600-106888600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:106886600-106888600 Enhancers Adipose Nuclei Adipose
40 chr4:106886600-106888600 Enhancers K562 blood
41 chr4:106886600-106888800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:106886600-106888800 Enhancers HSMMtube muscle
43 chr4:106886600-106889200 Enhancers Fetal Heart heart
44 chr4:106886600-106894600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr4:106886800-106887200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr4:106886800-106887600 Enhancers H1 Cell Line embryonic stem cell
47 chr4:106886800-106887600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr4:106886800-106887800 Enhancers HSMM muscle
49 chr4:106886800-106888600 Enhancers Placenta Placenta
50 chr4:106886800-106888800 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015