Variant report

Variant	rs10025245
Chromosome Location	chr4:47376049-47376050
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10022723	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10938489	1.00[AMR][1000 genomes]
rs4270565	1.00[AMR][1000 genomes]
rs4305497	1.00[AMR][1000 genomes]
rs4410503	1.00[AMR][1000 genomes]
rs4432727	1.00[AMR][1000 genomes]
rs4695241	1.00[AMR][1000 genomes]
rs6447561	1.00[AMR][1000 genomes]
rs6447563	1.00[AMR][1000 genomes]
rs6823407	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998919	chr4:47207023-47476876	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47375000-47377200	Enhancers	Muscle Satellite Cultured Cells	--
2	chr4:47375800-47376600	Enhancers	Hela-S3	cervix
3	chr4:47376000-47376600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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