Variant report

Variant rs10029149
Chromosome Location chr4:187126449-187126450
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187113800-187130600 Weak transcription Stomach Mucosa stomach
2 chr4:187113800-187131400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr4:187113800-187132200 Weak transcription Colonic Mucosa Colon
4 chr4:187114000-187133200 Weak transcription HSMM muscle
5 chr4:187114800-187130000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr4:187115200-187133600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr4:187115400-187130400 Weak transcription Small Intestine intestine
8 chr4:187117600-187140600 Weak transcription Aorta Aorta
9 chr4:187119800-187129800 Weak transcription Dnd41 blood
10 chr4:187119800-187130200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:187120000-187127000 Weak transcription Primary T cells from cord blood blood
12 chr4:187120000-187129800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr4:187121800-187132800 Weak transcription Brain Cingulate Gyrus brain
14 chr4:187122000-187129200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr4:187122000-187130200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr4:187123000-187127800 Strong transcription Liver Liver
17 chr4:187123600-187128800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:187123800-187130400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr4:187124600-187127200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr4:187125000-187126600 Enhancers Fetal Lung lung
21 chr4:187125000-187129800 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr4:187125200-187126600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr4:187125200-187126600 Enhancers Gastric stomach
24 chr4:187125600-187126600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
25 chr4:187125600-187127000 Strong transcription Brain Substantia Nigra brain
26 chr4:187125600-187130000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr4:187125800-187127200 Enhancers Sigmoid Colon Sigmoid Colon
28 chr4:187125800-187130200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:187125800-187130200 Weak transcription Fetal Kidney kidney
30 chr4:187125800-187136200 Weak transcription Psoas Muscle Psoas
31 chr4:187125800-187149200 Weak transcription Colon Smooth Muscle Colon
32 chr4:187126000-187126600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr4:187126000-187126800 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr4:187126000-187127400 Strong transcription Skeletal Muscle Male skeletal muscle
35 chr4:187126000-187129000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr4:187126000-187129400 Weak transcription Primary B cells from cord blood blood
37 chr4:187126000-187129800 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr4:187126000-187129800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr4:187126000-187130000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr4:187126000-187130000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr4:187126000-187130000 Weak transcription Fetal Brain Female brain
42 chr4:187126000-187130600 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr4:187126200-187126600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:187126200-187126600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr4:187126200-187126800 Enhancers Fetal Muscle Trunk muscle
46 chr4:187126200-187126800 Enhancers Fetal Thymus thymus
47 chr4:187126200-187127200 Strong transcription Brain Hippocampus Middle brain
48 chr4:187126200-187127400 Strong transcription Left Ventricle heart
49 chr4:187126200-187127400 Genic enhancers Pancreas Pancrea
50 chr4:187126200-187129800 Weak transcription Primary hematopoietic stem cells blood

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