Variant report
Variant | rs10036686 |
---|---|
Chromosome Location | chr5:114742083-114742084 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10052230 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10052335 | 0.95[EUR][1000 genomes] |
rs10054091 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10068248 | 0.91[EUR][1000 genomes] |
rs10072589 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10077253 | 0.91[EUR][1000 genomes] |
rs10078844 | 0.93[EUR][1000 genomes] |
rs10085045 | 0.91[EUR][1000 genomes] |
rs10478229 | 0.93[EUR][1000 genomes] |
rs10478230 | 0.93[EUR][1000 genomes] |
rs10478231 | 0.93[EUR][1000 genomes] |
rs1109015 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs1109016 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs12332367 | 0.95[EUR][1000 genomes] |
rs2004680 | 0.95[EUR][1000 genomes] |
rs2605185 | 1.00[EUR][1000 genomes] |
rs3752047 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs3752048 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs3752050 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs3752051 | 0.82[EUR][1000 genomes] |
rs3752052 | 0.82[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs3885971 | 0.91[EUR][1000 genomes] |
rs749760 | 0.91[EUR][1000 genomes] |
rs7713623 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7713947 | 1.00[EUR][1000 genomes] |
rs9986244 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9986246 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv916273 | chr5:114656592-115089901 | Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 28 gene(s) | inside rSNPs | diseases |
2 | nsv868915 | chr5:114723371-115252527 | Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:114741800-114742400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |