Variant report

Variant	rs10038756
Chromosome Location	chr5:16142887-16142888
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11955956	1.00[EUR][1000 genomes]
rs57177094	1.00[EUR][1000 genomes]
rs59774629	1.00[EUR][1000 genomes]
rs9312906	1.00[EUR][1000 genomes]
rs9968763	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830217	chr5:16004704-16225229	Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:16139000-16143200	Weak transcription	Right Ventricle	heart
2	chr5:16140400-16149600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr5:16141200-16144600	Enhancers	Ovary	ovary
4	chr5:16141200-16144800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr5:16141600-16143200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr5:16141600-16148600	Weak transcription	Left Ventricle	heart
7	chr5:16141800-16143200	Enhancers	Fetal Heart	heart
8	chr5:16142400-16144800	Enhancers	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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