The 2.0 version of rSNPBase

Variant report

Variant rs10045526
Chromosome Location chr5:68592751-68592752
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:68531400-68605000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr5:68541200-68620400 Weak transcription Stomach Mucosa stomach
3 chr5:68554200-68604400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr5:68564200-68611200 Weak transcription Fetal Brain Male brain
5 chr5:68565600-68627400 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr5:68566800-68610800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr5:68575600-68605000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr5:68575600-68608200 Weak transcription Right Ventricle heart
9 chr5:68576000-68605200 Weak transcription Left Ventricle heart
10 chr5:68576200-68605200 Weak transcription Brain Cingulate Gyrus brain
11 chr5:68576200-68609400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr5:68576400-68593000 Weak transcription HMEC breast
13 chr5:68576400-68614400 Weak transcription Colon Smooth Muscle Colon
14 chr5:68576400-68627600 Weak transcription Brain Substantia Nigra brain
15 chr5:68576400-68627800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr5:68576600-68595400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr5:68576600-68627800 Weak transcription Brain Angular Gyrus brain
18 chr5:68577200-68601400 Weak transcription Aorta Aorta
19 chr5:68577400-68594400 Weak transcription Esophagus oesophagus
20 chr5:68577400-68605200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr5:68577400-68607800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr5:68577400-68628200 Weak transcription Small Intestine intestine
23 chr5:68577600-68619800 Weak transcription Fetal Muscle Trunk muscle
24 chr5:68577600-68627400 Weak transcription NHEK skin
25 chr5:68577800-68626600 Weak transcription A549 lung
26 chr5:68579000-68603600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:68580600-68594200 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr5:68581600-68601200 Weak transcription Fetal Thymus thymus
29 chr5:68581600-68627600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr5:68581800-68593600 Weak transcription Pancreas Pancrea
31 chr5:68581800-68594200 Weak transcription Adipose Nuclei Adipose
32 chr5:68581800-68594400 Weak transcription Stomach Smooth Muscle stomach
33 chr5:68581800-68605200 Weak transcription GM12878-XiMat blood
34 chr5:68581800-68608200 Weak transcription Rectal Smooth Muscle rectum
35 chr5:68581800-68609000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:68581800-68609200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr5:68581800-68611000 Weak transcription Psoas Muscle Psoas
38 chr5:68581800-68617800 Weak transcription Brain Hippocampus Middle brain
39 chr5:68581800-68626800 Weak transcription Fetal Brain Female brain
40 chr5:68581800-68627600 Weak transcription Brain Anterior Caudate brain
41 chr5:68582000-68601600 Weak transcription Fetal Muscle Leg muscle
42 chr5:68582800-68622400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr5:68585000-68593400 Weak transcription Fetal Stomach stomach
44 chr5:68585000-68594200 Weak transcription Gastric stomach
45 chr5:68585000-68609000 Weak transcription Spleen Spleen
46 chr5:68586000-68594200 Weak transcription Primary hematopoietic stem cells blood
47 chr5:68587200-68602400 Strong transcription Fetal Intestine Small intestine
48 chr5:68587600-68597800 Strong transcription Liver Liver
49 chr5:68587800-68597800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr5:68588400-68595600 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015