The 2.0 version of rSNPBase

Variant report

Variant rs10055977
Chromosome Location chr5:127450589-127450590
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127421600-127466800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr5:127423600-127494000 Weak transcription K562 blood
3 chr5:127432400-127454600 Weak transcription Fetal Kidney kidney
4 chr5:127434800-127450600 Weak transcription Fetal Intestine Small intestine
5 chr5:127435200-127450800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr5:127437800-127451600 Weak transcription HMEC breast
7 chr5:127438000-127450600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:127441200-127450600 Weak transcription Aorta Aorta
9 chr5:127441200-127536800 Weak transcription Colonic Mucosa Colon
10 chr5:127441400-127450600 Weak transcription Ovary ovary
11 chr5:127441400-127450600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr5:127441400-127457400 Weak transcription Stomach Mucosa stomach
13 chr5:127441600-127450600 Weak transcription Brain Hippocampus Middle brain
14 chr5:127441600-127450600 Weak transcription Stomach Smooth Muscle stomach
15 chr5:127441800-127450600 Weak transcription Rectal Smooth Muscle rectum
16 chr5:127441800-127451000 Weak transcription Colon Smooth Muscle Colon
17 chr5:127442400-127525000 Weak transcription Right Ventricle heart
18 chr5:127443000-127457200 Weak transcription Pancreas Pancrea
19 chr5:127443000-127467000 Weak transcription Esophagus oesophagus
20 chr5:127443600-127450600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr5:127443800-127459800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr5:127444400-127457600 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr5:127445200-127450600 Weak transcription Lung lung
24 chr5:127445200-127456600 Weak transcription Spleen Spleen
25 chr5:127445200-127466800 Weak transcription Gastric stomach
26 chr5:127445200-127480200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr5:127445400-127491800 Weak transcription Psoas Muscle Psoas
28 chr5:127445600-127451000 Weak transcription Small Intestine intestine
29 chr5:127446000-127451200 Weak transcription GM12878-XiMat blood
30 chr5:127446200-127450600 Weak transcription Fetal Stomach stomach
31 chr5:127446400-127450600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr5:127446400-127450600 Weak transcription Fetal Muscle Leg muscle
33 chr5:127446600-127450600 Weak transcription Fetal Muscle Trunk muscle
34 chr5:127447000-127525000 Weak transcription Fetal Brain Male brain
35 chr5:127447600-127454800 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr5:127447600-127455000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr5:127447600-127455000 Strong transcription Fetal Intestine Large intestine
38 chr5:127447800-127450600 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr5:127447800-127450600 Weak transcription NHDF-Ad bronchial
40 chr5:127447800-127451200 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr5:127447800-127455000 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr5:127447800-127466600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr5:127448000-127450600 Weak transcription Brain Angular Gyrus brain
44 chr5:127448200-127450600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:127448200-127450600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:127448200-127450600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:127448200-127450600 Weak transcription HSMMtube muscle
48 chr5:127448200-127451400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr5:127448400-127452000 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr5:127448400-127454000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015