Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:108495412..108498266-chr5:108499945..108501590,2	K562	blood:

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10043497	0.85[AFR][1000 genomes]
rs10051367	0.84[AFR][1000 genomes]
rs10051556	1.00[AFR][1000 genomes]
rs10066363	0.84[AFR][1000 genomes]
rs10477943	0.84[AFR][1000 genomes]
rs13359297	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1975010	0.84[AFR][1000 genomes]
rs28668572	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882693	chr5:108391660-108502493	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv882694	chr5:108391660-108524416	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
3	nsv1027163	chr5:108445447-108839913	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
4	esv2756048	chr5:108448101-108542101	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:108468800-108521800	Weak transcription	Aorta	Aorta
2	chr5:108476000-108519200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr5:108476200-108506800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr5:108479000-108499800	Weak transcription	HSMMtube	muscle
5	chr5:108481600-108535000	Weak transcription	Left Ventricle	heart
6	chr5:108495200-108506200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr5:108496000-108532800	Weak transcription	Ovary	ovary
8	chr5:108496200-108501600	Weak transcription	Psoas Muscle	Psoas
9	chr5:108497000-108497600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr5:108497200-108497600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr5:108497200-108497600	Enhancers	NHLF	lung
12	chr5:108497200-108498000	Enhancers	GM12878-XiMat	blood
13	chr5:108497200-108498400	Enhancers	Muscle Satellite Cultured Cells	--
14	chr5:108497400-108497600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr5:108497400-108497800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr5:108497400-108497800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr5:108497400-108497800	Enhancers	NHEK	skin
18	chr5:108497400-108498400	Enhancers	HMEC	breast
19	chr5:108497400-108498400	Enhancers	Osteobl	bone
20	chr5:108497400-108498800	Enhancers	NHDF-Ad	bronchial
21	chr5:108497400-108499200	Enhancers	HSMM	muscle

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