Variant report

Variant	rs10068918
Chromosome Location	chr5:167434681-167434682
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10062914	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11960211	1.00[MEX][hapmap]
rs7733844	1.00[MEX][hapmap]
rs9918258	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830546	chr5:167303135-167456271	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167423400-167440600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:167423400-167455400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:167429000-167437600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr5:167432400-167442400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:167432600-167436400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:167432600-167442000	Weak transcription	NHEK	skin
7	chr5:167432800-167440800	Weak transcription	Fetal Brain Male	brain
8	chr5:167433000-167436800	Weak transcription	Right Ventricle	heart
9	chr5:167434000-167436000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr5:167434000-167437200	Weak transcription	Fetal Lung	lung
11	chr5:167434000-167439000	Weak transcription	HSMM	muscle
12	chr5:167434200-167436800	Weak transcription	Fetal Heart	heart
13	chr5:167434200-167442200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr5:167434600-167434800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr5:167434600-167435000	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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