The 2.0 version of rSNPBase

Variant report

Variant rs10069657
Chromosome Location chr5:118843583-118843584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118791800-118846600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:118794800-118861200 Weak transcription HSMM muscle
3 chr5:118804200-118879600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:118806000-118846400 Weak transcription Esophagus oesophagus
5 chr5:118806000-118846400 Weak transcription Spleen Spleen
6 chr5:118806200-118844800 Weak transcription Thymus Thymus
7 chr5:118806200-118846400 Weak transcription Pancreas Pancrea
8 chr5:118806200-118855600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:118806400-118845000 Weak transcription Fetal Stomach stomach
10 chr5:118806400-118846400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr5:118806800-118845400 Weak transcription Fetal Heart heart
12 chr5:118812000-118846400 Weak transcription NHLF lung
13 chr5:118814000-118845000 Weak transcription Gastric stomach
14 chr5:118814000-118845200 Weak transcription Aorta Aorta
15 chr5:118814800-118844800 Weak transcription Lung lung
16 chr5:118815800-118845400 Weak transcription HMEC breast
17 chr5:118816000-118844000 Weak transcription Hela-S3 cervix
18 chr5:118816000-118847000 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr5:118817000-118846400 Strong transcription Primary monocytes fromperipheralblood blood
20 chr5:118819600-118844400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr5:118820200-118846400 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr5:118821000-118843800 Weak transcription NHDF-Ad bronchial
23 chr5:118827600-118847800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr5:118829800-118844800 Weak transcription Rectal Smooth Muscle rectum
25 chr5:118830400-118845200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr5:118832400-118878200 Weak transcription NH-A brain
27 chr5:118832600-118844400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:118832600-118868600 Weak transcription Placenta Amnion Placenta Amnion
29 chr5:118832800-118843800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr5:118832800-118844600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr5:118833000-118860200 Weak transcription Stomach Mucosa stomach
32 chr5:118833200-118845000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr5:118833200-118845000 Weak transcription Ovary ovary
34 chr5:118833200-118845000 Weak transcription Stomach Smooth Muscle stomach
35 chr5:118833200-118846000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:118834400-118847800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:118834800-118846400 Weak transcription Small Intestine intestine
38 chr5:118836000-118844800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr5:118836000-118844800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr5:118836000-118850600 Weak transcription HUVEC blood vessel
41 chr5:118836600-118846400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr5:118837600-118846200 Weak transcription HepG2 liver
43 chr5:118837800-118844400 Weak transcription Primary T cells fromperipheralblood blood
44 chr5:118837800-118844400 Weak transcription Left Ventricle heart
45 chr5:118838000-118843800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr5:118838000-118869200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr5:118839800-118844400 Weak transcription Right Ventricle heart
48 chr5:118839800-118844800 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr5:118840000-118844400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr5:118840000-118844400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015