The 2.0 version of rSNPBase

Variant report

Variant rs10076739
Chromosome Location chr5:112453209-112453210
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112426800-112453800 Weak transcription HSMMtube muscle
2 chr5:112427000-112453800 Weak transcription Fetal Kidney kidney
3 chr5:112431200-112461600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr5:112432200-112454600 Weak transcription Pancreas Pancrea
5 chr5:112434000-112459200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr5:112437800-112454400 Weak transcription Fetal Muscle Trunk muscle
7 chr5:112438000-112454200 Weak transcription Psoas Muscle Psoas
8 chr5:112439600-112454600 Weak transcription Esophagus oesophagus
9 chr5:112440200-112454200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr5:112448600-112455000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr5:112448800-112454400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr5:112448800-112455200 Weak transcription HUVEC blood vessel
13 chr5:112449000-112453600 Weak transcription Right Atrium heart
14 chr5:112449800-112454200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:112450000-112454600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:112450000-112459200 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr5:112450400-112453600 Weak transcription Brain Hippocampus Middle brain
18 chr5:112450800-112454600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr5:112450800-112454600 Weak transcription Spleen Spleen
20 chr5:112451000-112453400 Weak transcription Primary T cells from cord blood blood
21 chr5:112451000-112453600 Weak transcription Adipose Nuclei Adipose
22 chr5:112451000-112454200 Weak transcription Fetal Brain Male brain
23 chr5:112451000-112454600 Weak transcription Lung lung
24 chr5:112451000-112460600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:112451000-112478800 Weak transcription Aorta Aorta
26 chr5:112451400-112453400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr5:112451400-112454800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr5:112451800-112454600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr5:112451800-112456200 Enhancers Ovary ovary
30 chr5:112452000-112454000 Enhancers Pancreatic Islets Pancreatic Islet
31 chr5:112452000-112454800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr5:112452200-112453400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr5:112452200-112454400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr5:112452200-112454600 Enhancers Fetal Heart heart
35 chr5:112452200-112455000 Enhancers Duodenum Mucosa Duodenum
36 chr5:112452600-112454000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:112452600-112455400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr5:112452600-112455600 Enhancers Fetal Lung lung
39 chr5:112452600-112456800 Enhancers Fetal Stomach stomach
40 chr5:112452800-112453800 Weak transcription Stomach Smooth Muscle stomach
41 chr5:112452800-112454000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr5:112452800-112454000 Enhancers HMEC breast
43 chr5:112452800-112454000 Enhancers NHEK skin
44 chr5:112452800-112454200 Genic enhancers Liver Liver
45 chr5:112452800-112455200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr5:112452800-112456000 Enhancers Fetal Muscle Leg muscle
47 chr5:112452800-112456200 Enhancers Cortex derived primary cultured neurospheres brain
48 chr5:112452800-112456200 Enhancers Right Ventricle heart
49 chr5:112452800-112457200 Enhancers Left Ventricle heart
50 chr5:112453000-112453400 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015