The 2.0 version of rSNPBase

Variant report

Variant rs10088444
Chromosome Location chr8:89337036-89337037
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:89320800-89337600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr8:89326600-89338200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr8:89333200-89337600 Weak transcription Rectal Smooth Muscle rectum
4 chr8:89333200-89341600 Active TSS Fetal Brain Female brain
5 chr8:89334600-89341600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
6 chr8:89335000-89341400 Active TSS Brain Inferior Temporal Lobe brain
7 chr8:89335000-89341400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr8:89335200-89341200 Active TSS Brain Germinal Matrix brain
9 chr8:89335400-89337200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr8:89335400-89337400 Active TSS Fetal Brain Male brain
11 chr8:89335800-89337800 Flanking Active TSS Osteobl bone
12 chr8:89335800-89339000 Active TSS Fetal Muscle Leg muscle
13 chr8:89335800-89341200 Active TSS HUES48 Cell Line embryonic stem cell
14 chr8:89336000-89337800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
15 chr8:89336000-89340200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr8:89336000-89340800 Active TSS Stomach Smooth Muscle stomach
17 chr8:89336000-89341000 Active TSS Aorta Aorta
18 chr8:89336000-89341000 Active TSS Fetal Stomach stomach
19 chr8:89336000-89341400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr8:89336000-89341400 Active TSS Brain Angular Gyrus brain
21 chr8:89336200-89337200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
22 chr8:89336200-89337600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr8:89336200-89338000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr8:89336200-89338600 Active TSS Brain Hippocampus Middle brain
25 chr8:89336200-89338600 Flanking Active TSS HUVEC blood vessel
26 chr8:89336200-89341400 Active TSS H1 Cell Line embryonic stem cell
27 chr8:89336200-89341400 Active TSS H9 Cell Line embryonic stem cell
28 chr8:89336200-89341400 Active TSS Brain Anterior Caudate brain
29 chr8:89336400-89338000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr8:89336400-89338000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr8:89336400-89338000 Enhancers Fetal Heart heart
32 chr8:89336400-89338400 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr8:89336400-89340800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
34 chr8:89336400-89341000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
35 chr8:89336400-89341200 Active TSS Brain Cingulate Gyrus brain
36 chr8:89336600-89337200 Flanking Active TSS NHDF-Ad bronchial
37 chr8:89336600-89337400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
38 chr8:89336600-89337600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr8:89336600-89337800 Active TSS Pancreatic Islets Pancreatic Islet
40 chr8:89336600-89340400 Active TSS Duodenum Smooth Muscle Duodenum
41 chr8:89336800-89337200 Enhancers Fetal Intestine Small intestine
42 chr8:89336800-89337400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
43 chr8:89336800-89337400 Flanking Active TSS NH-A brain
44 chr8:89336800-89337600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr8:89336800-89337600 Active TSS Fetal Lung lung
46 chr8:89336800-89338000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
47 chr8:89336800-89338400 Weak transcription Colon Smooth Muscle Colon
48 chr8:89336800-89341200 Active TSS iPS-15b Cell Line embryonic stem cell
49 chr8:89337000-89337200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
50 chr8:89337000-89337200 Flanking Active TSS Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015