Variant report
Variant | rs10089712 |
---|---|
Chromosome Location | chr8:11787505-11787506 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
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No data |
rs_ID | r2[population] |
---|---|
rs10087494 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10089580 | 0.82[AMR][1000 genomes] |
rs10092340 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10103485 | 0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs10112743 | 0.90[AFR][1000 genomes];0.93[EUR][1000 genomes] |
rs10112958 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10113042 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10113062 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10113145 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10216773 | 0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10903345 | 0.90[ASN][1000 genomes] |
rs11250175 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11250176 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs11250177 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11250178 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11250179 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11250182 | 0.82[ASN][1000 genomes] |
rs11996277 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs12681142 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12719914 | 0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12719915 | 0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13252853 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13252854 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13255498 | 0.81[EUR][1000 genomes] |
rs13261205 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13265816 | 0.90[ASN][1000 genomes] |
rs13269417 | 0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13275143 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs13279577 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13281077 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13281315 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs28510449 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs28838382 | 0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs34012738 | 0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs34117651 | 0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34266352 | 0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34419349 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34465618 | 0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34535807 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34583868 | 0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs34657250 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs35251245 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs35391955 | 0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs35626932 | 0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs35647515 | 0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs35657308 | 1.00[ASN][1000 genomes] |
rs35778860 | 0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs35890869 | 0.87[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs35905106 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs36100659 | 0.85[AMR][1000 genomes] |
rs4240678 | 1.00[ASN][1000 genomes] |
rs4367597 | 0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4840597 | 0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4840599 | 0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs4841639 | 0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4841641 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4841642 | 0.90[ASN][1000 genomes] |
rs4841644 | 0.90[ASN][1000 genomes] |
rs4841645 | 0.90[ASN][1000 genomes] |
rs4841646 | 0.90[ASN][1000 genomes] |
rs57356272 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs57597334 | 0.90[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs57787180 | 0.80[AMR][1000 genomes] |
rs58007588 | 0.90[ASN][1000 genomes] |
rs58049869 | 0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs58202536 | 0.99[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs58325983 | 0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs58556886 | 0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs58869268 | 0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs58963440 | 0.81[AMR][1000 genomes] |
rs59178038 | 0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs59423463 | 0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs60027424 | 0.82[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs60341692 | 0.81[AMR][1000 genomes] |
rs60495759 | 0.82[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs62493601 | 0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs62493617 | 0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs6601633 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs6601634 | 1.00[ASN][1000 genomes] |
rs6981461 | 0.82[ASN][1000 genomes] |
rs6987692 | 0.91[EUR][1000 genomes] |
rs6998690 | 0.90[ASN][1000 genomes] |
rs6999030 | 0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7006538 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs7014580 | 0.89[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs7459545 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7459983 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7461273 | 0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7463895 | 0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs7464553 | 0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs7812563 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7815179 | 0.87[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs7815186 | 0.87[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs7815572 | 0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7815595 | 0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7816182 | 0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7820338 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7821336 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs7824267 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs7825529 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7830734 | 0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7833079 | 0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs7833685 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7842810 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9329251 | 0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9692662 | 0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs9692668 | 0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9693925 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs9694940 | 0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs9694967 | 0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs9886639 | 0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv529399 | chr8:10970091-11805960 | Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 54 gene(s) | inside rSNPs | diseases |
2 | nsv1018978 | chr8:11438267-11858466 | Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 29 gene(s) | inside rSNPs | diseases |
3 | nsv1027378 | chr8:11541739-11858466 | Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 27 gene(s) | inside rSNPs | diseases |
4 | nsv1028229 | chr8:11575762-11805961 | Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 23 gene(s) | inside rSNPs | diseases |
5 | nsv539475 | chr8:11575762-11805961 | Flanking Active TSS Genic enhancers Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 23 gene(s) | inside rSNPs | diseases |
6 | nsv1034014 | chr8:11602337-11858466 | Enhancers Active TSS Strong transcription Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 26 gene(s) | inside rSNPs | diseases |
7 | nsv1034132 | chr8:11657033-12198242 | Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 52 gene(s) | inside rSNPs | diseases |
8 | nsv890366 | chr8:11666451-11900847 | Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
9 | nsv1018042 | chr8:11667496-11882385 | Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 17 gene(s) | inside rSNPs | diseases |
10 | nsv890367 | chr8:11668153-11793529 | Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
11 | nsv890369 | chr8:11671041-11840011 | Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
12 | nsv1016952 | chr8:11679271-11849955 | Flanking Active TSS Genic enhancers Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
13 | nsv1029093 | chr8:11679271-11858466 | Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
14 | nsv539478 | chr8:11679271-11858466 | Bivalent/Poised TSS Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
15 | nsv1031972 | chr8:11696393-11805961 | Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
16 | nsv539481 | chr8:11696393-11805961 | Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
17 | nsv610293 | chr8:11698747-11929734 | Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 22 gene(s) | inside rSNPs | diseases |
18 | nsv516685 | chr8:11698747-12570199 | Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 74 gene(s) | inside rSNPs | diseases |
19 | nsv1029694 | chr8:11727357-11858466 | Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
20 | esv2758148 | chr8:11741558-12567301 | ZNF genes & repeats Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 70 gene(s) | inside rSNPs | diseases |
21 | nsv427815 | chr8:11741558-12567301 | Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 70 gene(s) | inside rSNPs | diseases |
22 | nsv428195 | chr8:11741558-12567301 | Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 70 gene(s) | inside rSNPs | diseases |
23 | esv2759593 | chr8:11741558-12601971 | Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 73 gene(s) | inside rSNPs | diseases |
24 | nsv1029934 | chr8:11747133-11858466 | Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
25 | nsv1016332 | chr8:11751798-11861797 | Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
26 | nsv1016544 | chr8:11754663-11849955 | Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
27 | nsv539482 | chr8:11754663-11849955 | Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
28 | nsv890370 | chr8:11755513-11900847 | Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
29 | nsv491752 | chr8:11758865-12467543 | Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 58 gene(s) | inside rSNPs | diseases |
30 | nsv890371 | chr8:11771089-11896831 | Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
31 | nsv971286 | chr8:11777476-11787599 | Enhancers Weak transcription | TF binding regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
32 | nsv1026344 | chr8:11786255-11897177 | Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:11786000-11799400 | Weak transcription | Right Atrium | heart |
2 | chr8:11786600-11788600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
3 | chr8:11786800-11790600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
4 | chr8:11787000-11790600 | Weak transcription | NHEK | skin |