Variant report

Variant	rs10091260
Chromosome Location	chr8:64303965-64303966
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10091256	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28374712	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv6229	chr8:64282018-64326530	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64295600-64304000	Weak transcription	Brain Germinal Matrix	brain
2	chr8:64302800-64304000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr8:64303000-64304000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr8:64303000-64308800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:64303400-64304000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:64303600-64304000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr8:64303600-64304000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr8:64303600-64304800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:64303800-64304000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:64303800-64304000	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr8:64303800-64304000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr8:64303800-64304000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr8:64303800-64304000	Enhancers	Adipose Nuclei	Adipose
14	chr8:64303800-64304000	Enhancers	Brain Cingulate Gyrus	brain
15	chr8:64303800-64304000	Enhancers	Dnd41	blood
16	chr8:64303800-64304400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr8:64303800-64304800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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