Variant report

Variant	rs10098991
Chromosome Location	chr8:36440409-36440410
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs4739319	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023238	chr8:36252557-36530138	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1034824	chr8:36398752-36530138	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv6155	chr8:36407646-36452741	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1023001	chr8:36417309-36482111	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv1016306	chr8:36423652-36480301	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv831287	chr8:36430788-36605374	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv1027937	chr8:36434982-36572189	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10098991	ADAM32	cis	cerebellum	SCAN
rs10098991	C8orf4	cis	cerebellum	SCAN

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:36432400-36440800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr8:36439000-36440800	Weak transcription	Fetal Heart	heart
3	chr8:36440000-36440800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:36440000-36442000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:36440200-36440600	Enhancers	NHEK	skin
6	chr8:36440200-36441000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:36440200-36441000	Enhancers	Fetal Brain Female	brain
8	chr8:36440200-36441400	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr8:36440200-36442200	Enhancers	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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