Variant report

Variant	rs10101033
Chromosome Location	chr8:59290963-59290964
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:58907173..58909750-chr8:59290550..59292564,2	MCF-7	breast:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10088529	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10089218	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10093546	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10095327	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10102128	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10102134	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10103007	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10105194	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10105218	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10105634	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10107787	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10107880	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10108626	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10109576	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10808693	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11775830	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11775849	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11783782	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11785262	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11997457	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12056833	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12056934	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17199615	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17200731	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17259490	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17259642	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28601797	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28778150	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28845482	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4379435	0.81[AFR][1000 genomes]
rs4567025	0.81[ASN][1000 genomes]
rs55815841	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56124268	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56676655	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58076547	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58701488	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6471698	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6471702	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6471703	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6471704	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6471705	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs66690596	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6982264	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6982401	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6995701	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7010280	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7818645	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7824702	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7839098	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7839268	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7839545	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7842721	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9297992	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9297993	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9657062	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9657063	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9657064	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9987224	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59288800-59291400	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr8:59289000-59291400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr8:59289400-59291400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr8:59289400-59292000	Enhancers	Fetal Brain Female	brain
5	chr8:59289600-59291000	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr8:59289600-59291200	Enhancers	Brain Angular Gyrus	brain
7	chr8:59289600-59291400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
8	chr8:59289800-59292200	Enhancers	Primary T cells from cord blood	blood
9	chr8:59290000-59291200	Enhancers	Brain Germinal Matrix	brain
10	chr8:59290000-59291200	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr8:59290000-59291400	Enhancers	Brain Anterior Caudate	brain
12	chr8:59290000-59291800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr8:59290000-59292400	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr8:59290200-59291000	Enhancers	Muscle Satellite Cultured Cells	--
15	chr8:59290200-59291200	Enhancers	Primary neutrophils fromperipheralblood	blood
16	chr8:59290200-59293000	Enhancers	Liver	Liver
17	chr8:59290400-59291200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
18	chr8:59290400-59291800	Enhancers	Primary B cells from peripheral blood	blood
19	chr8:59290600-59291200	Enhancers	Brain Cingulate Gyrus	brain
20	chr8:59290600-59291200	Enhancers	Fetal Lung	lung
21	chr8:59290600-59291400	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr8:59290600-59291400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
23	chr8:59290800-59291000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr8:59290800-59291000	Flanking Active TSS	Brain Hippocampus Middle	brain
25	chr8:59290800-59291000	Flanking Active TSS	Fetal Brain Male	brain
26	chr8:59290800-59291400	Enhancers	Primary hematopoietic stem cells	blood
27	chr8:59290800-59291400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr8:59290800-59291400	Flanking Active TSS	GM12878-XiMat	blood
29	chr8:59290800-59291600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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