Variant report

Variant	rs10109916
Chromosome Location	chr8:103710305-103710306
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	nsv1026755	chr8:103676970-103728556	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1018625	chr8:103676970-103729197	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103705400-103714400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr8:103705600-103710400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr8:103705600-103710600	Weak transcription	HSMMtube	muscle
4	chr8:103705800-103710400	Weak transcription	NHEK	skin
5	chr8:103706000-103710400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:103706600-103710600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:103706600-103710600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:103708600-103710400	Weak transcription	K562	blood
9	chr8:103709200-103710600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr8:103710200-103710800	Enhancers	A549	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links