Variant report

Variant	rs10115280
Chromosome Location	chr9:101347931-101347932
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:101334595..101337716-chr9:101344699..101348746,4	MCF-7	breast:
2	chr9:101337939..101341594-chr9:101346528..101349148,3	K562	blood:
3	chr9:101326856..101330632-chr9:101345515..101347959,3	MCF-7	breast:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831665	chr9:101170061-101367692	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv614936	chr9:101182698-101680380	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	nsv1040325	chr9:101328103-101354107	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv466438	chr9:101328200-101361584	Weak transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv614949	chr9:101328200-101361584	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv893614	chr9:101340316-101671634	Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
7	nsv614950	chr9:101345778-101362833	Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3408208	chr9:101346881-101349379	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3374490	chr9:101346956-101349504	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv2476007	chr9:101347139-101348929	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv512109	chr9:101347192-101348321	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3482575	chr9:101347853-101348435	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3512138	chr9:101347874-101348474	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3512137	chr9:101347900-101348360	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3482570	chr9:101347909-101348389	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3482571	chr9:101347915-101348437	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv2173122	chr9:101347916-101348499	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv6836	chr9:101347925-101348572	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv3327576	chr9:101347928-101348367	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv3512136	chr9:101347928-101348370	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv3482573	chr9:101347930-101348363	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101332800-101355600	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr9:101347200-101358800	Weak transcription	Fetal Brain Female	brain
3	chr9:101347400-101351200	Weak transcription	Fetal Brain Male	brain

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