Variant report

Variant	rs10121718
Chromosome Location	chr9:94265106-94265107
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs28609704	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28662404	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755169	chr9:94243545-94267645	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94259800-94266800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:94263400-94266000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr9:94263400-94267800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr9:94263800-94265800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:94263800-94266000	Weak transcription	K562	blood
6	chr9:94263800-94266200	Weak transcription	A549	lung
7	chr9:94264400-94266800	Enhancers	Colon Smooth Muscle	Colon
8	chr9:94264600-94266600	Enhancers	Rectal Smooth Muscle	rectum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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