Variant report

Variant	rs10129844
Chromosome Location	chr14:81599636-81599637
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10129752	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10131039	1.00[AMR][1000 genomes]
rs10138625	0.97[AFR][1000 genomes]
rs10144187	1.00[AMR][1000 genomes]
rs10149425	1.00[MEX][hapmap]
rs11845532	1.00[AMR][1000 genomes]
rs12587252	1.00[MEX][hapmap]
rs28526415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28722616	1.00[AMR][1000 genomes]
rs7152740	1.00[MEX][hapmap]
rs9323695	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81592200-81609000	Weak transcription	Thymus	Thymus
2	chr14:81592400-81601000	Weak transcription	Dnd41	blood
3	chr14:81597800-81600200	Enhancers	Liver	Liver
4	chr14:81598000-81599800	Enhancers	Fetal Brain Female	brain
5	chr14:81599200-81600200	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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