Variant report

Variant	rs1013090
Chromosome Location	chr5:91604680-91604681
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73131587	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73131596	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs73131597	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3366180	chr5:91601896-91605094	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91604000-91606000	Enhancers	A549	lung
2	chr5:91604000-91607200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr5:91604000-91607200	Enhancers	Fetal Heart	heart
4	chr5:91604200-91605000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:91604200-91605400	Enhancers	Fetal Lung	lung
6	chr5:91604200-91606400	Enhancers	Muscle Satellite Cultured Cells	--
7	chr5:91604400-91606600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr5:91604600-91605800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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