Variant report
| Variant | rs10152868 |
|---|---|
| Chromosome Location | chr15:79230969-79230970 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:79203600-79231000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 2 | chr15:79215400-79233200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 3 | chr15:79215400-79236600 | Weak transcription | Small Intestine | intestine |
| 4 | chr15:79215600-79232800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr15:79219600-79236200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr15:79220200-79231800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 7 | chr15:79220200-79235200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr15:79220600-79236200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr15:79220600-79236400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr15:79222000-79232000 | Strong transcription | HepG2 | liver |
| 11 | chr15:79222200-79233400 | Weak transcription | Thymus | Thymus |
| 12 | chr15:79222400-79236400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 13 | chr15:79223800-79236000 | Weak transcription | HSMMtube | muscle |
| 14 | chr15:79223800-79236200 | Weak transcription | Brain Angular Gyrus | brain |
| 15 | chr15:79224200-79236400 | Weak transcription | Colonic Mucosa | Colon |
| 16 | chr15:79224400-79231000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 17 | chr15:79224400-79236600 | Weak transcription | HMEC | breast |
| 18 | chr15:79224600-79236200 | Weak transcription | Psoas Muscle | Psoas |
| 19 | chr15:79225600-79236400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 20 | chr15:79226400-79236000 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr15:79226600-79236200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 22 | chr15:79227000-79236000 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr15:79227200-79231800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 24 | chr15:79227200-79236000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 25 | chr15:79227200-79236200 | Weak transcription | Placenta | Placenta |
| 26 | chr15:79227400-79231000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr15:79227400-79234800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 28 | chr15:79227400-79236400 | Weak transcription | Aorta | Aorta |
| 29 | chr15:79227400-79236600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr15:79227600-79236200 | Weak transcription | Right Ventricle | heart |
| 31 | chr15:79228000-79231800 | Weak transcription | Left Ventricle | heart |
| 32 | chr15:79228000-79236000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 33 | chr15:79228200-79235400 | Weak transcription | Brain Anterior Caudate | brain |
| 34 | chr15:79229000-79233200 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 35 | chr15:79229200-79232800 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 36 | chr15:79229400-79231200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 37 | chr15:79229400-79232200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 38 | chr15:79229400-79232400 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 39 | chr15:79229600-79231000 | Enhancers | Brain Substantia Nigra | brain |
| 40 | chr15:79229800-79236200 | Weak transcription | Esophagus | oesophagus |
| 41 | chr15:79230000-79231000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 42 | chr15:79230000-79231200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 43 | chr15:79230000-79231200 | Strong transcription | Liver | Liver |
| 44 | chr15:79230000-79231600 | Enhancers | Primary B cells from peripheral blood | blood |
| 45 | chr15:79230000-79231800 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr15:79230000-79231800 | Weak transcription | Lung | lung |
| 47 | chr15:79230000-79232000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 48 | chr15:79230000-79232000 | Enhancers | Primary T cells from cord blood | blood |
| 49 | chr15:79230000-79235000 | Weak transcription | Brain Hippocampus Middle | brain |
| 50 | chr15:79230000-79235600 | Weak transcription | Fetal Stomach | stomach |
