Variant report
| Variant | rs10160269 |
|---|---|
| Chromosome Location | chr11:16849931-16849932 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:16813200-16871400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 2 | chr11:16823000-16871400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 3 | chr11:16836000-16861600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 4 | chr11:16839200-16878800 | Weak transcription | Thymus | Thymus |
| 5 | chr11:16842400-16862200 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr11:16842600-16852600 | Weak transcription | Placenta | Placenta |
| 7 | chr11:16842600-16853600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 8 | chr11:16842600-16854200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 9 | chr11:16842600-16855000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr11:16842600-16873400 | Weak transcription | Hela-S3 | cervix |
| 11 | chr11:16842800-16862200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 12 | chr11:16843000-16874600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 13 | chr11:16844000-16862000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 14 | chr11:16844400-16861200 | Weak transcription | HMEC | breast |
| 15 | chr11:16845000-16850600 | Genic enhancers | Fetal Heart | heart |
| 16 | chr11:16845800-16855200 | Strong transcription | HepG2 | liver |
| 17 | chr11:16846000-16850600 | Strong transcription | Liver | Liver |
| 18 | chr11:16846200-16857800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr11:16846400-16852800 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 20 | chr11:16846600-16874000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr11:16846800-16850800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr11:16847000-16864000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 23 | chr11:16847000-16871200 | Weak transcription | Brain Substantia Nigra | brain |
| 24 | chr11:16847200-16871400 | Weak transcription | Brain Hippocampus Middle | brain |
| 25 | chr11:16847600-16850600 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr11:16847600-16852800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 27 | chr11:16847600-16857000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr11:16847800-16853000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr11:16847800-16865000 | Weak transcription | Fetal Muscle Leg | muscle |
| 30 | chr11:16847800-16871600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 31 | chr11:16848000-16850600 | Strong transcription | Colonic Mucosa | Colon |
| 32 | chr11:16848000-16853000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr11:16848000-16853800 | Weak transcription | Right Atrium | heart |
| 34 | chr11:16848000-16854200 | Weak transcription | Brain Anterior Caudate | brain |
| 35 | chr11:16848000-16862400 | Weak transcription | Adipose Nuclei | Adipose |
| 36 | chr11:16848000-16863000 | Weak transcription | Lung | lung |
| 37 | chr11:16848200-16853000 | Weak transcription | A549 | lung |
| 38 | chr11:16848200-16853400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 39 | chr11:16848200-16853800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 40 | chr11:16848200-16854200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr11:16848200-16854200 | Weak transcription | Left Ventricle | heart |
| 42 | chr11:16848200-16854600 | Weak transcription | Fetal Stomach | stomach |
| 43 | chr11:16848200-16854600 | Weak transcription | Spleen | Spleen |
| 44 | chr11:16848200-16855000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 45 | chr11:16848200-16857200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 46 | chr11:16848200-16857600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr11:16848200-16861200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 48 | chr11:16848200-16861400 | Weak transcription | Ovary | ovary |
| 49 | chr11:16848200-16862400 | Weak transcription | Esophagus | oesophagus |
| 50 | chr11:16848200-16863000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
