The 2.0 version of rSNPBase

Variant report

Variant rs1017195
Chromosome Location chr14:78332198-78332199
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:78297600-78336600 Weak transcription Left Ventricle heart
2 chr14:78297800-78353600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr14:78301400-78342200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr14:78306000-78356400 Weak transcription Thymus Thymus
5 chr14:78310000-78339400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr14:78310400-78345000 Weak transcription Brain Cingulate Gyrus brain
7 chr14:78314200-78348400 Weak transcription Colon Smooth Muscle Colon
8 chr14:78320800-78342200 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr14:78321400-78342800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr14:78321800-78335400 Weak transcription Psoas Muscle Psoas
11 chr14:78321800-78348400 Weak transcription Placenta Placenta
12 chr14:78322000-78342000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr14:78322000-78342600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr14:78322200-78353400 Weak transcription Duodenum Mucosa Duodenum
15 chr14:78323400-78339600 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr14:78324000-78353600 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr14:78324200-78354800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr14:78324400-78339800 Weak transcription Ovary ovary
19 chr14:78325000-78332400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr14:78325000-78345000 Weak transcription Brain Angular Gyrus brain
21 chr14:78326400-78339800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr14:78326400-78342000 Weak transcription Adipose Nuclei Adipose
23 chr14:78326600-78352800 Weak transcription Esophagus oesophagus
24 chr14:78327000-78338000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr14:78327000-78339400 Weak transcription Fetal Muscle Leg muscle
26 chr14:78327000-78342000 Weak transcription Lung lung
27 chr14:78327200-78348600 Weak transcription Fetal Muscle Trunk muscle
28 chr14:78327800-78400600 Weak transcription Colonic Mucosa Colon
29 chr14:78328000-78338200 Weak transcription Stomach Smooth Muscle stomach
30 chr14:78328000-78353400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr14:78329000-78345000 Weak transcription Brain Substantia Nigra brain
32 chr14:78329000-78345800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr14:78329000-78347600 Weak transcription Brain Anterior Caudate brain
34 chr14:78329000-78348400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr14:78329200-78345400 Weak transcription Right Ventricle heart
36 chr14:78329400-78336400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr14:78329400-78345200 Weak transcription Brain Hippocampus Middle brain
38 chr14:78330200-78332200 ZNF genes & repeats Fetal Intestine Small intestine
39 chr14:78330400-78334400 Strong transcription Primary T cells from cord blood blood
40 chr14:78330800-78334200 Weak transcription Dnd41 blood
41 chr14:78331000-78333200 Weak transcription Gastric stomach
42 chr14:78331600-78332200 Strong transcription Primary B cells from cord blood blood
43 chr14:78331800-78332200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr14:78331800-78332200 Enhancers Pancreas Pancrea
45 chr14:78331800-78332200 Enhancers K562 blood
46 chr14:78331800-78333200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr14:78332000-78332200 ZNF genes & repeats Spleen Spleen

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Last update: Aug 31, 2015