The 2.0 version of rSNPBase

Variant report

Variant rs10173380
Chromosome Location chr2:39245380-39245381
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39211000-39247600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr2:39213400-39251200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:39213400-39259800 Weak transcription Right Ventricle heart
4 chr2:39213800-39308000 Weak transcription Pancreas Pancrea
5 chr2:39219000-39259200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr2:39227600-39303400 Weak transcription Colonic Mucosa Colon
7 chr2:39229000-39251400 Weak transcription Fetal Heart heart
8 chr2:39229800-39293000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:39232600-39300000 Weak transcription Brain Cingulate Gyrus brain
10 chr2:39235400-39249600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr2:39235400-39312000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:39235600-39247600 Weak transcription HSMMtube muscle
13 chr2:39235600-39251800 Weak transcription NHEK skin
14 chr2:39235600-39259800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:39235600-39259800 Weak transcription Spleen Spleen
16 chr2:39235600-39293200 Weak transcription Fetal Brain Male brain
17 chr2:39235600-39295800 Weak transcription NHLF lung
18 chr2:39235600-39298200 Weak transcription Small Intestine intestine
19 chr2:39235600-39327800 Weak transcription Esophagus oesophagus
20 chr2:39235800-39249600 Weak transcription Thymus Thymus
21 chr2:39235800-39257800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:39235800-39284000 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:39235800-39293600 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:39236000-39247600 Weak transcription Left Ventricle heart
25 chr2:39236000-39249600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:39236000-39260000 Weak transcription Hela-S3 cervix
27 chr2:39236000-39295600 Weak transcription Aorta Aorta
28 chr2:39236000-39295800 Weak transcription H9 Cell Line embryonic stem cell
29 chr2:39236000-39305600 Weak transcription Gastric stomach
30 chr2:39236200-39305600 Weak transcription Lung lung
31 chr2:39236400-39263400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr2:39236800-39245600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:39237000-39260200 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr2:39237600-39257600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr2:39237800-39249800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr2:39238400-39256400 Weak transcription Fetal Intestine Small intestine
37 chr2:39238400-39260600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:39238600-39256400 Weak transcription Fetal Stomach stomach
39 chr2:39239200-39249600 Weak transcription Fetal Muscle Leg muscle
40 chr2:39239400-39245600 Weak transcription H1 Cell Line embryonic stem cell
41 chr2:39239400-39249600 Weak transcription HUVEC blood vessel
42 chr2:39239400-39254600 Weak transcription Brain Germinal Matrix brain
43 chr2:39240400-39249400 Weak transcription HMEC breast
44 chr2:39240400-39250800 Weak transcription Primary hematopoietic stem cells blood
45 chr2:39240600-39249600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:39240600-39249600 Weak transcription Primary T cells from cord blood blood
47 chr2:39240600-39249600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:39240800-39245600 Weak transcription Brain Angular Gyrus brain
49 chr2:39240800-39249400 Weak transcription Osteobl bone
50 chr2:39240800-39249600 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015