The 2.0 version of rSNPBase

Variant report

Variant rs10193498
Chromosome Location chr2:174094345-174094346
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:174048600-174095200 Weak transcription Thymus Thymus
2 chr2:174058000-174112800 Weak transcription Spleen Spleen
3 chr2:174061200-174097600 Weak transcription Lung lung
4 chr2:174063600-174097600 Weak transcription HSMM muscle
5 chr2:174063800-174095000 Weak transcription Right Ventricle heart
6 chr2:174064200-174097600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:174069400-174097000 Weak transcription Fetal Muscle Trunk muscle
8 chr2:174069400-174097600 Weak transcription Primary B cells from cord blood blood
9 chr2:174069600-174096600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr2:174072200-174095400 Weak transcription Right Atrium heart
11 chr2:174075400-174097600 Weak transcription Muscle Satellite Cultured Cells --
12 chr2:174077400-174096400 Weak transcription Hela-S3 cervix
13 chr2:174078800-174097800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:174082200-174095800 Weak transcription Fetal Stomach stomach
15 chr2:174082200-174097400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:174083400-174100600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr2:174083400-174136400 Weak transcription Esophagus oesophagus
18 chr2:174083600-174103400 Weak transcription NHLF lung
19 chr2:174083800-174095000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:174083800-174097600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr2:174083800-174097600 Weak transcription NHDF-Ad bronchial
22 chr2:174083800-174119200 Weak transcription HMEC breast
23 chr2:174084000-174095200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:174084000-174095800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr2:174084000-174095800 Weak transcription Rectal Smooth Muscle rectum
26 chr2:174084600-174097600 Weak transcription Primary hematopoietic stem cells blood
27 chr2:174086200-174095000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:174086200-174101600 Weak transcription Ovary ovary
29 chr2:174086400-174095800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:174086400-174095800 Weak transcription Colon Smooth Muscle Colon
31 chr2:174086400-174096400 Weak transcription Dnd41 blood
32 chr2:174086400-174098400 Weak transcription GM12878-XiMat blood
33 chr2:174086600-174095800 Weak transcription Adipose Nuclei Adipose
34 chr2:174087000-174096800 Weak transcription Placenta Placenta
35 chr2:174088200-174095800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:174088400-174097600 Weak transcription Osteobl bone
37 chr2:174088800-174095800 Weak transcription Stomach Smooth Muscle stomach
38 chr2:174089400-174097400 Weak transcription NHEK skin
39 chr2:174089600-174103000 Weak transcription K562 blood
40 chr2:174089800-174096800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr2:174090200-174095600 Weak transcription Fetal Heart heart
42 chr2:174090200-174095800 Weak transcription HSMMtube muscle
43 chr2:174090400-174095800 Weak transcription Left Ventricle heart
44 chr2:174091800-174094600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:174092000-174096000 Weak transcription Stomach Mucosa stomach
46 chr2:174092200-174094400 Enhancers Brain Anterior Caudate brain
47 chr2:174092200-174095000 Weak transcription Primary T cells from cord blood blood
48 chr2:174092200-174109400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr2:174092400-174095200 Weak transcription Liver Liver
50 chr2:174092400-174095800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015