Variant report

Variant	rs10194245
Chromosome Location	chr2:211879484-211879485
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10197299	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1087944	1.00[ASN][1000 genomes]
rs1087946	1.00[ASN][1000 genomes]
rs1864353	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28406274	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28751054	1.00[ASN][1000 genomes]
rs319716	1.00[ASN][1000 genomes]
rs319719	1.00[ASN][1000 genomes]
rs416389	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012193	chr2:211684524-212072213	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:211879000-211879600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:211879000-211880400	Enhancers	Liver	Liver
3	chr2:211879400-211879800	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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