The 2.0 version of rSNPBase

Variant report

Variant rs10204985
Chromosome Location chr2:180128579-180128580
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180126400-180128600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr2:180126400-180130200 Active TSS Stomach Smooth Muscle stomach
3 chr2:180127200-180129600 Active TSS HMEC breast
4 chr2:180127200-180129800 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr2:180127400-180128600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr2:180127400-180128600 Flanking Active TSS Adipose Nuclei Adipose
7 chr2:180127400-180128600 Flanking Active TSS Osteobl bone
8 chr2:180127600-180128600 Flanking Active TSS Primary B cells from cord blood blood
9 chr2:180127600-180128600 Active TSS Right Atrium heart
10 chr2:180127600-180128800 Flanking Active TSS Dnd41 blood
11 chr2:180127600-180129600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:180127600-180129800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr2:180127600-180129800 Active TSS Aorta Aorta
14 chr2:180127600-180129800 Active TSS Duodenum Mucosa Duodenum
15 chr2:180127600-180130000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr2:180127800-180128600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:180127800-180128800 Flanking Active TSS Primary hematopoietic stem cells blood
18 chr2:180127800-180128800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
19 chr2:180127800-180129000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr2:180127800-180129600 Active TSS Fetal Stomach stomach
21 chr2:180127800-180129800 Active TSS ES-I3 Cell Line embryonic stem cell
22 chr2:180127800-180129800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:180127800-180129800 Active TSS Brain Angular Gyrus brain
24 chr2:180127800-180129800 Active TSS Brain Hippocampus Middle brain
25 chr2:180127800-180129800 Active TSS HSMMtube muscle
26 chr2:180127800-180129800 Active TSS NHLF lung
27 chr2:180127800-180130000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:180127800-180130000 Active TSS Fetal Kidney kidney
29 chr2:180127800-180130000 Active TSS Pancreatic Islets Pancreatic Islet
30 chr2:180127800-180130200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:180128000-180128600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr2:180128000-180128600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
33 chr2:180128000-180128600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr2:180128000-180128600 Active TSS Brain Germinal Matrix brain
35 chr2:180128000-180128600 Flanking Active TSS Fetal Intestine Small intestine
36 chr2:180128000-180128600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
37 chr2:180128000-180128800 Flanking Active TSS Primary monocytes fromperipheralblood blood
38 chr2:180128000-180128800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
39 chr2:180128000-180128800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:180128000-180128800 Active TSS Fetal Brain Male brain
41 chr2:180128000-180128800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
42 chr2:180128000-180129000 Bivalent/Poised TSS Primary T helper naive cells from peripheral blood blood
43 chr2:180128000-180129200 Active TSS ES-WA7 Cell Line embryonic stem cell
44 chr2:180128000-180129600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:180128000-180129600 Active TSS Primary B cells from peripheral blood blood
46 chr2:180128000-180129600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:180128000-180129600 Active TSS Brain Cingulate Gyrus brain
48 chr2:180128000-180129800 Active TSS iPS-20b Cell Line embryonic stem cell
49 chr2:180128000-180129800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr2:180128000-180130000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015