Variant report

Variant	rs10218498
Chromosome Location	chr1:216965834-216965835
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10218758	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs10495035	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs10495036	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11117675	1.00[CEU][hapmap];0.96[GIH][hapmap];0.93[EUR][1000 genomes]
rs11117678	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11572621	0.86[CHD][hapmap]
rs11809114	0.90[CHD][hapmap]
rs12040591	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12043579	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12048695	1.00[CEU][hapmap];0.96[GIH][hapmap];0.91[TSI][hapmap];0.95[EUR][1000 genomes]
rs1572738	1.00[CEU][hapmap];0.96[GIH][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs17043774	0.90[CHD][hapmap]
rs17043849	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7522593	0.82[GIH][hapmap]
rs9970445	1.00[CEU][hapmap];0.96[GIH][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762162	chr1:216942781-216966140	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216958800-216967400	Weak transcription	Right Atrium	heart
2	chr1:216963600-216966200	Weak transcription	Gastric	stomach
3	chr1:216963800-216966600	Weak transcription	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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