Variant report

Variant	rs10220368
Chromosome Location	chr14:69717568-69717569
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69712401..69714746-chr14:69715640..69718165,2	MCF-7	breast:
2	chr14:69716336..69718485-chr14:69728021..69730750,2	MCF-7	breast:
3	chr14:69716596..69719427-chr14:69725434..69727636,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258520	Chromatin interaction
ENSG00000100626	Chromatin interaction

rs_ID	r²[population]
rs10130169	0.95[AFR][1000 genomes]
rs17106813	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55929324	0.94[ASN][1000 genomes]
rs57586543	0.87[ASN][1000 genomes]
rs59735892	0.91[ASN][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
2	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
3	chr14:69703400-69719600	Weak transcription	HMEC	breast
4	chr14:69704800-69725800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:69706000-69722600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr14:69708400-69721800	Weak transcription	Fetal Brain Female	brain
7	chr14:69708400-69725800	Weak transcription	Pancreas	Pancrea
8	chr14:69708600-69722000	Weak transcription	Brain Cingulate Gyrus	brain
9	chr14:69708800-69718400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr14:69708800-69719600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr14:69708800-69723000	Weak transcription	Fetal Intestine Small	intestine
12	chr14:69709200-69722800	Weak transcription	Brain Germinal Matrix	brain
13	chr14:69709400-69722600	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr14:69709400-69725800	Weak transcription	Brain Anterior Caudate	brain
15	chr14:69709400-69726400	Weak transcription	Gastric	stomach
16	chr14:69709800-69725400	Weak transcription	Brain Angular Gyrus	brain
17	chr14:69713200-69717600	Enhancers	Fetal Muscle Leg	muscle
18	chr14:69714400-69718400	Weak transcription	Fetal Stomach	stomach
19	chr14:69714800-69719600	Weak transcription	HSMM	muscle
20	chr14:69714800-69721200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr14:69714800-69726200	Weak transcription	Aorta	Aorta
22	chr14:69715600-69718200	Weak transcription	NHLF	lung
23	chr14:69716600-69717600	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr14:69716600-69724600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr14:69716800-69722000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr14:69717000-69718200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr14:69717000-69725200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr14:69717200-69719800	Weak transcription	HSMMtube	muscle
29	chr14:69717400-69718200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr14:69717400-69719600	Weak transcription	Fetal Muscle Trunk	muscle
31	chr14:69717400-69722600	Weak transcription	Right Ventricle	heart
32	chr14:69717400-69723400	Weak transcription	Brain Hippocampus Middle	brain
33	chr14:69717400-69725800	Weak transcription	Left Ventricle	heart

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