Variant report

Variant	rs10226737
Chromosome Location	chr7:103020398-103020399
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103008122..103010482-chr7:103019967..103021498,2	K562	blood:
2	chr7:102945838..102949503-chr7:103019550..103022202,3	K562	blood:
3	chr7:103015661..103018560-chr7:103018928..103023107,3	K562	blood:
4	chr7:103009562..103011311-chr7:103018091..103020895,2	K562	blood:
5	chr7:103014686..103018560-chr7:103018834..103021905,4	K562	blood:
6	chr7:102946980..102949686-chr7:103019517..103021353,2	K562	blood:
7	chr7:102936289..102939956-chr7:103018982..103022360,3	K562	blood:

No data

No data

No data

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10155812	0.91[ASW][hapmap];0.91[LWK][hapmap];0.84[YRI][hapmap];0.93[AFR][1000 genomes]
rs10263219	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4523184	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4637751	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4998618	0.88[AFR][1000 genomes]
rs6651100	0.93[AFR][1000 genomes]
rs6651112	0.99[AFR][1000 genomes]
rs72655388	0.93[AFR][1000 genomes]
rs7455319	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	esv3334511	chr7:103019816-103023814	Weak transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3430749	chr7:103020016-103023614	Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3401578	chr7:103020116-103023514	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102989800-103021200	Weak transcription	Fetal Heart	heart
2	chr7:103009000-103021000	Weak transcription	Gastric	stomach
3	chr7:103009000-103021000	Weak transcription	Pancreas	Pancrea
4	chr7:103009000-103021200	Weak transcription	Fetal Lung	lung
5	chr7:103009000-103029200	Weak transcription	Spleen	Spleen
6	chr7:103009200-103020800	Weak transcription	HepG2	liver
7	chr7:103010800-103021000	Weak transcription	Duodenum Mucosa	Duodenum
8	chr7:103019600-103020400	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr7:103020000-103020600	Flanking Active TSS	K562	blood
10	chr7:103020200-103020400	Flanking Bivalent TSS/Enh	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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