The 2.0 version of rSNPBase

Variant report

Variant rs1023751
Chromosome Location chr2:209118249-209118250
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:209093000-209118400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:209101200-209118400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr2:209104800-209118400 Weak transcription Aorta Aorta
4 chr2:209105000-209118800 Weak transcription Gastric stomach
5 chr2:209106800-209118400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:209106800-209118400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:209106800-209118800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:209108800-209118400 Strong transcription H9 Cell Line embryonic stem cell
9 chr2:209112800-209118800 Weak transcription Lung lung
10 chr2:209113600-209118600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr2:209113800-209118600 Weak transcription Colonic Mucosa Colon
12 chr2:209114000-209118400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:209114200-209118400 Weak transcription Fetal Stomach stomach
14 chr2:209114200-209118400 Weak transcription Small Intestine intestine
15 chr2:209114200-209118400 Weak transcription Thymus Thymus
16 chr2:209114200-209118800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:209114200-209118800 Weak transcription Esophagus oesophagus
18 chr2:209114200-209118800 Weak transcription Spleen Spleen
19 chr2:209114400-209118400 Weak transcription Psoas Muscle Psoas
20 chr2:209114600-209118400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr2:209114800-209118400 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:209115200-209118400 Enhancers Primary B cells from cord blood blood
23 chr2:209115200-209118400 Genic enhancers Primary B cells from peripheral blood blood
24 chr2:209115800-209118400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr2:209116200-209118400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr2:209116400-209118400 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr2:209116400-209118400 Transcr. at gene 5' and 3' Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:209116400-209118400 Enhancers Colon Smooth Muscle Colon
29 chr2:209116400-209118800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
30 chr2:209116400-209119000 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
31 chr2:209116600-209118400 Enhancers Brain Cingulate Gyrus brain
32 chr2:209116600-209118400 Enhancers Brain Substantia Nigra brain
33 chr2:209116600-209118600 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
34 chr2:209116600-209118600 Enhancers Stomach Mucosa stomach
35 chr2:209116800-209118400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:209116800-209118600 Enhancers Fetal Intestine Small intestine
37 chr2:209116800-209118800 Flanking Active TSS Liver Liver
38 chr2:209117000-209118400 Genic enhancers Fetal Brain Male brain
39 chr2:209117000-209118400 Transcr. at gene 5' and 3' HepG2 liver
40 chr2:209117000-209118600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
41 chr2:209117000-209118600 Enhancers Primary monocytes fromperipheralblood blood
42 chr2:209117000-209118600 Transcr. at gene 5' and 3' K562 blood
43 chr2:209117000-209119000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:209117000-209119600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:209117200-209118400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:209117200-209118400 Weak transcription Fetal Muscle Leg muscle
47 chr2:209117200-209118400 Weak transcription Left Ventricle heart
48 chr2:209117200-209118800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
49 chr2:209117200-209118800 Enhancers Placenta Amnion Placenta Amnion
50 chr2:209117200-209120400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015