Variant report

Variant	rs10243995
Chromosome Location	chr7:147469585-147469586
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10265480	0.87[ASN][1000 genomes]
rs7799501	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147461200-147469600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr7:147461200-147472800	Weak transcription	Brain Angular Gyrus	brain
3	chr7:147466800-147469800	Weak transcription	Brain Hippocampus Middle	brain
4	chr7:147468600-147469800	Weak transcription	Brain Substantia Nigra	brain
5	chr7:147468800-147472600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr7:147468800-147472600	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr7:147468800-147473000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr7:147469400-147469600	Weak transcription	Brain Anterior Caudate	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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